iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Codon Optimised Sequence Pullcodon_optimisation Version 1 (Activity)Used to indicate that a sequence was codon optimised after pulling from the source and before submission
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
GC Optimised Sequence PullGC_Optimised Version 1 (Activity)Used to indicate that a sequence was GC optimised after pulling from the source and before submission
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
aiiABBa_C0060 Version 1 (Component)autoinducer inactivation enzyme from Bacillus; hydrolyzes acetyl homoserine lactone
BBa_K1072010BBa_K1072010 Version 1 (Component)Odr-10(diacetyl)GPCR with optimized codon
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
BBa_K775003BBa_K775003 Version 1 (Component)RI7-odr10 (diacetyl) chimeric GPCR with promoter and terminator
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
BBa_K1491017BBa_K1491017 Version 1 (Component)Codon Optimized Supernova
BBa_K1491015BBa_K1491015 Version 1 (Component)Codon Optimized KillerRed
BBa_K953004BBa_K953004 Version 1 (Component)Hemeoxygenase with RBS (E. coli Codon Optimised)
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
BBa_K1100006BBa_K1100006 Version 1 (Component)optimized sfGFP with Csy4 insulator loci
mCherryBBa_J06505 Version 1 (Component)monomeric RFP optimized for bacteria
BBa_K953002BBa_K953002 Version 1 (Component)Agrobacterium tumefaciens Bacteriophytochrome with RBS (E. coli Codon Optimised)
BBa_K775004BBa_K775004 Version 1 (Component)GPCR reporter FUS1-EGFP
BBa_K1051000BBa_K1051000 Version 1 (Component)Stop codon free RFP in RFC[23] standard
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
BBa_K953000BBa_K953000 Version 1 (Component)Heme Oxygenase with T7 & RBS (E. coli Codon Optimised)
BBa_K228000BBa_K228000 Version 1 (Component)T7ptag(T7polymerase with amber mutation)
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
BBa_K801080BBa_K801080 Version 1 (Component)Prepro-Thaumatin, yeast codon optimized
BBa_K775008BBa_K775008 Version 1 (Component)diacetyl chimeric GPCR with Fus1-EGFP reporter
BBa_K1789003BBa_K1789003 Version 1 (Component)GFP1(with termination codon)
mCherryBBa_E2060 Version 1 (Component)derivative of mRFP1, yeast-optimized
BBa_K2066527BBa_K2066527 Version 1 (Component)B0034 with scar TACTAG
BBa_K1051009BBa_K1051009 Version 1 (Component)e.coli terminator ilvGEDA_T with stop codon
BBa_K1692004BBa_K1692004 Version 1 (Component)codon optimized PAL with T7 promoter and Flag Tag
mRFP1BBa_E2050 Version 1 (Component)derivative of mRFP1, yeast-optimized
BBa_K2066518BBa_K2066518 Version 1 (Component)mCherry (with start codon)
BBa_K105012BBa_K105012 Version 1 (Component)10 aa flexible protein domain linker
BBa_K809601BBa_K809601 Version 1 (Component)GAL promoter (kozak) without start codon ATG
InteinBBa_K300004 Version 1 (Component)Engineered pH-inducible intein (codon optimized for E. coli) - internal domain
BBa_K1491016BBa_K1491016 Version 1 (Component)Lac Inducible Codon Optimized KillerRed
BBa_K1491018BBa_K1491018 Version 1 (Component)Lac Inducible Codon Optimized Supernova
zif23BBa_C2001 Version 1 (Component)Zif23-GCN4 engineered repressor (+LVA, C2000 codon-optimized for E.coli)
HR-HisBBa_K1642001 Version 1 (Component)Codon-optimized Halorhodopsin with His-tag
BBa_K137040BBa_K137040 Version 1 (Component)Coding SSM device: GFP with (AGTC)10 after start codon