iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
CD4 signalBBa_I712009 Version 1 (Component)CD4 signal peptide; localizes to plasma membrane
BBa_K541526BBa_K541526 Version 1 (Component)reflectin for b.subtilis with LipA signal peptide
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
FurBO_11498 Version 1 (Component) BBa_K541502BBa_K541502 Version 1 (Component)Promoter Pveg, RBS spoVG and LipA signal peptide for B. subtilis
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_J36835BBa_J36835 Version 1 (Component)Lipoprotein signal peptide
BBa_K1592000BBa_K1592000 Version 1 (Component)LIP2 prepro(signal peptide)
RBS-spoVGBBa_K143021 Version 1 (Component)SpoVG ribosome binding site (RBS) for B. subtilis
BBa_K541525BBa_K541525 Version 1 (Component)LALF for Bacillus subtilis with LipA signal peptide
SPzim17BBa_K809201 Version 1 (Component)signal peptide of ZIM17
BBa_K209402BBa_K209402 Version 1 (Component)AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]
Pveg-spoVGBBa_K143053 Version 1 (Component)Promoter Pveg and RBS spoVG for B. subtilis
BBa_K554002BBa_K554002 Version 1 (Component)HlyA secretion signal peptide
BBa_K541501BBa_K541501 Version 1 (Component)Promoter Pveg, RBS spoVG and SacB signal peptide for B. subtilis
BBa_K541027BBa_K541027 Version 1 (Component)Reflectin 1A (LipA) and LALF (LipA) protein for B.subtilis
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
PvegBBa_K143012 Version 1 (Component)Promoter veg a constitutive promoter for B. subtilis
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
BBa_K541025BBa_K541025 Version 1 (Component)Reflectin 1A (LipA) and LALF (SacB) protein for B.subtilis
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
BBa_K2069001BBa_K2069001 Version 1 (Component)pT7 + RBS + Reflectin (+LipA tag)
BBa_K1351008BBa_K1351008 Version 1 (Component)Signal peptide of B. subtilis endonuclease YhcR
BBa_K541026BBa_K541026 Version 1 (Component)Reflectin 1A (SacB) and LALF (LipA) protein for B.subtilis
SP-aprEBBa_K1674000 Version 1 (Component)Secretion signal peptide originated from the B.subtilis extracellular protease AprE
BBa_K541516BBa_K541516 Version 1 (Component)Reflectin1A for B.subtiis with SacB signal sequence
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
BBa_K1351026BBa_K1351026 Version 1 (Component)Signal peptide of B. subtilis major autolysin LytC
BBa_K1351027BBa_K1351027 Version 1 (Component)Signal peptide of B. subtilis minor autolysin LytE
BBa_K1989025BBa_K1989025 Version 1 (Component)Triplespycatcher with FlAsH-tag and signal peptide LipA
SPferBBa_K809202 Version 1 (Component)signal peptide of FER
BBa_M36726BBa_M36726 Version 1 (Component)Type II Signal Peptide
BBa_K2069003BBa_K2069003 Version 1 (Component)pT7 + RBS + Reflectin (+LipA tag) + RBS + Cpn10
BBa_K1989044BBa_K1989044 Version 1 (Component)Triplespytag with mRFP, FlAsH-tag and signal peptide LipA
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
SPtom70BBa_K809205 Version 1 (Component)signal peptide of Tom70
SPtom40BBa_K809204 Version 1 (Component)signal peptide of Tom40
BBa_K228000BBa_K228000 Version 1 (Component)T7ptag(T7polymerase with amber mutation)
BBa_K1989035BBa_K1989035 Version 1 (Component)Triple spytag with mSA, FlAsH-tag and signal peptide LipA