iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
Amp CasBBa_I13800 Version 1 (Component)Ampicillin Resistance Cassette
GFP reportBBa_E0240 Version 1 (Component)GFP generator
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_I746000BBa_I746000 Version 1 (Component)AIP generator (agrB + agrD with RBSes)
GFP generaBBa_E0840 Version 1 (Component)GFP generator
BBa_I746100BBa_I746100 Version 1 (Component)AIP sensor infrastructure (agrC + agrA from S. aureus with RBSes)
BBa_I746001BBa_I746001 Version 1 (Component)I746000 (AIP generator - agrB + agrD with RBSes) + B0015 (Terminator)
AbrBBO_9091 Version 1 (Component) BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
BBa_I746101BBa_I746101 Version 1 (Component)I746100 (AIP sensor infrastructure - agrC + agrA with RBSes) + B0015 (Terminator)
BBa_I746103BBa_I746103 Version 1 (Component)I746101 (AIP sensor infrastructure - agrC + agrA with RBSes + Terminator) + I746104 (Inducible P2)
BBa_I746008BBa_I746008 Version 1 (Component)I0500 (Inducible pBad/araC) + I746001 (AIP generator - agrB + agrD with RBSes + Terminator)
LuxRBBa_I0462 Version 1 (Component)luxR Protein Generator
agrDBBa_K090601 Version 1 (Component)AgrD: AGR System AIP Precursor
BBa_J13002BBa_J13002 Version 1 (Component)TetR repressed POPS/RIPS generator
BBa_I746104BBa_I746104 Version 1 (Component)P2 promoter in agr operon from S. aureus
BBa_K748000BBa_K748000 Version 1 (Component)AgrA protein coding sequence. AgrA is the main component of S.aureus agr quorum sensing system.
BBa_K748001BBa_K748001 Version 1 (Component)AgrC protein coding sequence. AgrC is main component of S.aureus agr quorum sensing system.
BBa_K1022119BBa_K1022119 Version 1 (Component)pBAD: RBS : agrC : RBS : agrA : TT : pP2
BBa_K081014BBa_K081014 Version 1 (Component)RFP protein generator - PoPS->RFP
BBa_K1351036BBa_K1351036 Version 1 (Component)Quorum sensing two component system (AIP-II sensing histidine kinase agrC, response regulator agrA)
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
BBa_I746105BBa_I746105 Version 1 (Component)GFP with agr P2 promoter
BBa_K359003BBa_K359003 Version 1 (Component)Agr P2 with RFP
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
BBa_I746009BBa_I746009 Version 1 (Component)AIP generator + outer membrane permeability
BBa_K228000BBa_K228000 Version 1 (Component)T7ptag(T7polymerase with amber mutation)
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
BBa_K2066527BBa_K2066527 Version 1 (Component)B0034 with scar TACTAG
BBa_K1369003BBa_K1369003 Version 1 (Component)AgrC+4xSH3 domain
BBa_I0466BBa_I0466 Version 1 (Component)RhlR Protein Generator
AARBBa_K590032 Version 1 (Component)Acyl-ACP Reductase (AAR) - Synechococcus elongatus PCC7942
BBa_K1369005BBa_K1369005 Version 1 (Component)AgrA; P2 promoter+GFP
BBa_K359002BBa_K359002 Version 1 (Component)Agr quroum sensing sensor/generator, FepA pore, with P2 + reporter
BBa_K359001BBa_K359001 Version 1 (Component)AIP sensor and generator with FepA pore
BBa_K204047BBa_K204047 Version 1 (Component)AI-1 generator
BBa_K1051006BBa_K1051006 Version 1 (Component)Saccharomycescerevisiae TBY-1 terminator with stopcodon
BBa_K359006BBa_K359006 Version 1 (Component)AIP sensor and generator
BBa_K359005BBa_K359005 Version 1 (Component)Senses AIP and has RFP reporter (from Agr quorum sensing system)
BBa_K1022121BBa_K1022121 Version 1 (Component)pBAD: Agr A : Agr C : pP2 : RBS: His6- SUMO: Signiferin: RBS TetR :TT
BBa_K1022120BBa_K1022120 Version 1 (Component)pBAD: Agr A : Agr C : pP2 : RBS: His6- SUMO: MaximinH5: RBS TetR :TT