iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
BBa_B0034BBa_B0034 Version 1 (Component)RBS (Elowitz 1999) -- defines RBS efficiency
BBa_B0012BBa_B0012 Version 1 (Component)TE from coliphageT7
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0015BBa_B0015 Version 1 (Component)double terminator (B0010-B0012)
BBa_B0010BBa_B0010 Version 1 (Component)T1 from E. coli rrnB
BBa_B0030BBa_B0030 Version 1 (Component)RBS.1 (strong) -- modified from R. Weiss
BBa_J23100BBa_J23100 Version 1 (Component)constitutive promoter family member
lacIBBa_C0012 Version 1 (Component)lacI repressor from E. coli (+LVA)
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
lux pRBBa_R0062 Version 1 (Component)Promoter (luxR & HSL regulated -- lux pR)
luxrBBa_C0062 Version 1 (Component)luxR repressor/activator, (no LVA?)
BBa_B0014BBa_B0014 Version 1 (Component)double terminator (B0012-B0011)
BBa_J23101BBa_J23101 Version 1 (Component)constitutive promoter family member
BBa_J23119BBa_J23119 Version 1 (Component)constitutive promoter family member
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
Amp CasBBa_I13800 Version 1 (Component)Ampicillin Resistance Cassette
BBa_J23106BBa_J23106 Version 1 (Component)constitutive promoter family member
BBa_J23110BBa_J23110 Version 1 (Component)constitutive promoter family member
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0011BBa_B0011 Version 1 (Component)LuxICDABEG (+/-)
lacIBBa_Q04121 Version 1 (Component)QPI (B0034.C0012.B0015.R0011)
cI+luxRBBa_R0065 Version 1 (Component)Promoter (lambda cI and luxR regulated -- hybrid)
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
lux pLBBa_R0063 Version 1 (Component)Promoter (luxR & HSL regulated -- lux pL)<br>
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
BBa_A340620BBa_A340620 Version 1 (Component)Quadpart Amplifier (B0034.C0062.B0015.R0062)
BBa_K314103BBa_K314103 Version 1 (Component)Lac induced expression cassette
BBa_I739001BBa_I739001 Version 1 (Component)Constitutive expression cassette for TetR +LVA (J23100.B0034.C0040.B0015)
BBa_E0430BBa_E0430 Version 1 (Component)EYFP (RBS+ LVA- TERM) (B0034.E0030.B0015)
LuxRBBa_I0462 Version 1 (Component)luxR Protein Generator
Scar 25BBa_B0105 Version 1 (Component)RFC 25 Scar Sequence
tetRBBa_Q04400 Version 1 (Component)QPI (B0034.C0040.B0015.R0040)
BBa_K314100BBa_K314100 Version 1 (Component)High constitutive expression cassette
BBa_J23109BBa_J23109 Version 1 (Component)constitutive promoter family member
BBa_Q01121BBa_Q01121 Version 1 (Component)QPI (B0031.C0012.B0015.R0011)
BBa_Q04510BBa_Q04510 Version 1 (Component)QPI (B0034.C0051.B0015.R0051)
aiiABBa_C0060 Version 1 (Component)autoinducer inactivation enzyme from Bacillus; hydrolyzes acetyl homoserine lactone
BBa_J23102BBa_J23102 Version 1 (Component)constitutive promoter family member
BBa_B0035BBa_B0035 Version 1 (Component)RBS (B0030 derivative)
BBa_S0100BBa_S0100 Version 1 (Component)B0034.C0012
BBa_B0025BBa_B0025 Version 1 (Component)double terminator (B0015), reversed