Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

BBa_B0034
BBa_B0034 Version 1 (Component)
RBS (Elowitz 1999) -- defines RBS efficiency

BBa_B0012
BBa_B0012 Version 1 (Component)
TE from coliphageT7

BBa_B0010
BBa_B0010 Version 1 (Component)
T1 from E. coli rrnB

BBa_B0015
BBa_B0015 Version 1 (Component)
double terminator (B0010-B0012)

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

BBa_B0030
BBa_B0030 Version 1 (Component)
RBS.1 (strong) -- modified from R. Weiss

BBa_B0032
BBa_B0032 Version 1 (Component)
RBS.3 (medium) -- derivative of BBa_0030

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030

BBa_B0011
BBa_B0011 Version 1 (Component)
LuxICDABEG (+/-)

BBa_B0014
BBa_B0014 Version 1 (Component)
double terminator (B0012-B0011)

Scar 25
BBa_B0105 Version 1 (Component)
RFC 25 Scar Sequence

BBa_B0033
BBa_B0033 Version 1 (Component)
RBS.4 (weaker) -- derivative of BBa_0030

BBa_B0025
BBa_B0025 Version 1 (Component)
double terminator (B0015), reversed

BBa_B0016
BBa_B0016 Version 1 (Component)
Terminator (T7 RNAP specific, T_Phi)

BBa_B0017
BBa_B0017 Version 1 (Component)
double terminator (B0010-B0010)

BBa_B0024
BBa_B0024 Version 1 (Component)
double terminator (B0012-B0011), reversed

BBa_B0035
BBa_B0035 Version 1 (Component)
RBS (B0030 derivative)

spacer
BBa_B0040 Version 1 (Component)
Spacer.1 (generic)

BBa_B0013
BBa_B0013 Version 1 (Component)
TE from coliphage T7 (+/-)

BBa_B0053
BBa_B0053 Version 1 (Component)
Terminator (His)

BBa_K823042
BBa_K823042 Version 1 (Component)
PsspK promoter regulated by sigma G

BBa_B0029
BBa_B0029 Version 1 (Component)
1 bp deletion from B0031

BBa_B0021
BBa_B0021 Version 1 (Component)
LuxICDABEG (+/-), reversed

BBa_K823014
BBa_K823014 Version 1 (Component)
Anderson promoter J23118

BBa_K823004
BBa_K823004 Version 1 (Component)
Anderson promoter J23100

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_B0055
BBa_B0055 Version 1 (Component)
-- No description --

BBa_B0054
BBa_B0054 Version 1 (Component)
Transcriptional terminator

pSBBs4S
BBa_K823024 Version 1 (Component)
pSB_Bs4S-P<i>_xyl</i>: Integrative expression vector for <i>Bacillus subtilis</i

BBa_B0062
BBa_B0062 Version 1 (Component)
Terminator (Reverse B0052)

BBa_K223042
BBa_K223042 Version 1 (Component)
Blh Gene: Cleaves beta-carotene into retinal

xyl+efe
BBa_K1065204 Version 1 (Component)
Efe+Bba_B0015 in BBa_K823024 (pXyl)

TSS
BBa_B0042 Version 1 (Component)
Translational stop sequence

TOPO
BBa_B0044 Version 1 (Component)
Topoisomerase I mediated cloning site (reverse)

TOPO
BBa_B0043 Version 1 (Component)
Topoisomerase I mediated cloning site (forward)

BBa_B0023
BBa_B0023 Version 1 (Component)
TE from coliphage T7, reversed

pSBBs0K
BBa_K823026 Version 1 (Component)
pSB_Bs0K-P_spac (replicative Bacillus subtilis expression vector; IPTG inducible

BBa_K223022
BBa_K223022 Version 1 (Component)
IL-6 + HlyA

BBa_B0064
BBa_B0064 Version 1 (Component)
Tuned RBS for Q04401

BBa_B0036
BBa_B0036 Version 1 (Component)
Specialized RBS

NheI
BBa_B0045 Version 1 (Component)
NheI restriction enzyme site (XbaI, SpeI compatible overhang)

pSBBs1C
BBa_K823021 Version 1 (Component)
pSB_Bs1C-<i>lacZ</i> (lacZ reporter vector for <i>B. subtilis</i>)

pSBBs3C
BBa_K823025 Version 1 (Component)
pSB_Bs3C-<i>luxABCDE</i> (lux reporter vector for B.subtilis)

BBa_K823028
BBa_K823028 Version 1 (Component)
luc luciferase + RBS, codon optimized for Bacillus subtilis

BBa_K823029
BBa_K823029 Version 1 (Component)
mKate2, a red monomeric fluorescent protein, B. subtilis optimized

BBa_J44001
BBa_J44001 Version 1 (Component)
Reverse RBS (RBS_rev) -- corresponds to BBa_B0030

BBa_K235024
BBa_K235024 Version 1 (Component)
[K235018][K235021] (mCherry generator, ribokey-mediated signal inversion)