Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K608351BBa_K608351 Version 1 (Component)(correct) temperature sensitive promoter
lacI tsBBa_J06501 Version 1 (Component)LacI repressor (temperature-sensitive mut 265) (+LVA)
xis/intBBa_K112132 Version 1 (Component)Xis Int controlled by temperature sensitive
BBa_K112133BBa_K112133 Version 1 (Component)Xis Int temperature sensitive expression cassette
BBa_T9002BBa_T9002 Version 1 (Component)GFP Producer Controlled by 3OC6HSL Receiver Device
His-StopBBa_K133133 Version 1 (Component)His affinity tag-stop
lacI tsBBa_J06500 Version 1 (Component)LacI repressor (temperature-sensitive mut 241) (+LVA)
BBa_K861173BBa_K861173 Version 1 (Component)mRFP generator controlled by PcstA (glucose-repressible promoter)
BBa_K362004BBa_K362004 Version 1 (Component)sodA promoter is controlled by some transcription factors including SoxS.
BBa_K362005BBa_K362005 Version 1 (Component)sufA , this promoter is controlled by OxyR.
BBa_K362001BBa_K362001 Version 1 (Component)ahpC, this promoter is controlled by the OxyR protein.
Prm +BBa_I12006 Version 1 (Component)Modified lamdba Prm promoter (repressed by 434 cI)
xis/intBBa_K112234 Version 1 (Component){rbs.xis.int!} The bacteriophage lambda xis/integrase gene with native rbs and stop codon; assembly
BBa_J107033BBa_J107033 Version 1 (Component)cI temperature sensitive
RGD-His-StBBa_K133036 Version 1 (Component)RGD-His affinity tag-Stop
BBa_K145301BBa_K145301 Version 1 (Component)lacI controlled by key/lock
BBa_I760005BBa_I760005 Version 1 (Component)Cu-sensitive promoter
BBa_K115007BBa_K115007 Version 1 (Component)Temperature sensitive 5
BBa_K115006BBa_K115006 Version 1 (Component)Temperature sensitive 5
BBa_K115005BBa_K115005 Version 1 (Component)Temperature sensitive 5
BBa_J37032BBa_J37032 Version 1 (Component)GFP expression controlled by LuxR promoter
BBa_K200016BBa_K200016 Version 1 (Component)Temperature Sensitive Lambda cI Repressor
BBa_I741018BBa_I741018 Version 1 (Component)Right facing promoter (for xylF) controlled by xylR and CRP-cAMP
BBa_K540001BBa_K540001 Version 1 (Component)rcn, cobalt-sensitive promoter
BBa_K362002BBa_K362002 Version 1 (Component)dps,this promoter is controlled by OxyR protein
BBa_K115004BBa_K115004 Version 1 (Component)A temperature sensitive 5
BBa_K145300BBa_K145300 Version 1 (Component)Lactonase controlled by key/lock
BBa_K362003BBa_K362003 Version 1 (Component)oxyR,this promoter is controlled by CRP-cAMP
BBa_K362000BBa_K362000 Version 1 (Component)AcrAB,this promoter is controlled by SoxS protein.
BBa_K914008BBa_K914008 Version 1 (Component)Meganuclease I-SceI controlled by pRha
BBa_K914007BBa_K914007 Version 1 (Component)Meganuclease I-SceI controlled by pBad
pSB8A15FRTBBa_K864020 Version 1 (Component)Low copy BioBrick temperature sensitive standard vector
pSB8A15BBa_K864016 Version 1 (Component)Low copy BioBrick temperature sensitive standard vector
pSB8C15BBa_K864017 Version 1 (Component)Low copy BioBrick temperature sensitive standard vector
pSB8C15FRTBBa_K864021 Version 1 (Component)Low copy BioBrick temperature sensitive standard vector
pSB8K15BBa_K864018 Version 1 (Component)Low copy BioBrick temperature sensitive standard vector
pSB8K15FRTBBa_K864022 Version 1 (Component)Low copy BioBrick temperature sensitive standard vector
pSB8S15FRTBBa_K864023 Version 1 (Component)Low copy BioBrick temperature sensitive standard vector
pSB8S15BBa_K864019 Version 1 (Component)Low copy BioBrick temperature sensitive standard vector
BBa_K145303BBa_K145303 Version 1 (Component)GFP generator controlled by key/lock
BBa_I763026BBa_I763026 Version 1 (Component)LacI coding device regulated by pTetR
BBa_I13202BBa_I13202 Version 1 (Component)3OC<sub>6</sub>HSL Sender Controlled by Lac Repressible Promoter
pSC101 tsBBa_I50052 Version 1 (Component)pSC101 temperature sensitive origin of replication
cI857BBa_K200011 Version 1 (Component)Temperature Sensitive Lamda cI Repressor