Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
pBad/araCBBa_I0500 Version 1 (Component)Inducible pBad/araC promoter
BBa_I13453BBa_I13453 Version 1 (Component)Pbad promoter
BBa_J61101BBa_J61101 Version 1 (Component)Ribosome Binding Site Family Member
pBADBBa_K206000 Version 1 (Component)pBAD strong
LasR+PAIBBa_R0079 Version 1 (Component)Promoter (LasR & PAI regulated)
BBa_J61120BBa_J61120 Version 1 (Component)Ribosome Binding Site Family Member
BBa_K138001BBa_K138001 Version 1 (Component)nifHp driving mutant NifL in Leucine Landing Pad
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_J61100BBa_J61100 Version 1 (Component)Ribosome Binding Site Family Member
BBa_I766102BBa_I766102 Version 1 (Component)EE Leucine Zipper
PA1_04sPA1_04s Version 1 (Component) BBa_K138000BBa_K138000 Version 1 (Component)NifHp in BioBrick Compatible Leucine Landing Pad
BBa_K1321002BBa_K1321002 Version 1 (Component)Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25
BBa_K1321003BBa_K1321003 Version 1 (Component)Re-entry of BBa_K863101, Cellulose Binding Domain CBDcex in rfc25
PBS_F24PBS_F24 Version 1 (Component) BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
BBa_K270002BBa_K270002 Version 1 (Component)Leucine Landing Pad
BBa_I766103BBa_I766103 Version 1 (Component)RR Leucine Zipper
BBa_I720007BBa_I720007 Version 1 (Component)araBp->rpoN (leucine landing pad)
AraBBa_K808000 Version 1 (Component)araC-Pbad - Arabinose inducible regulatory promoter/repressor unit
BBa_K1314000BBa_K1314000 Version 1 (Component)Ammonium repressible nifH promoter(from Azotobacter vinelandii)
BBa_K1314014BBa_K1314014 Version 1 (Component)nifK-XhoI-nifH promoter T7 expression system(weak)
BBa_K1314013BBa_K1314013 Version 1 (Component)nifK-XhoI-nifH promoter T7 expression system(strong)
BAT2BBa_J45008 Version 1 (Component)branched-chain amino acid transaminase (BAT2); converts leucine to alpha-ketoisocaproate
BBa_J202014BBa_J202014 Version 1 (Component)PBAD Mutant#15
BBa_J202011BBa_J202011 Version 1 (Component)PBAD Mutant#12
BBa_J202013BBa_J202013 Version 1 (Component)PBAD Mutant#14
BBa_J202005BBa_J202005 Version 1 (Component)PBAD Mutant#6
BBa_J202008BBa_J202008 Version 1 (Component)PBAD Mutant#9
BBa_J202000BBa_J202000 Version 1 (Component)PBAD mutant#1
BBa_J202004BBa_J202004 Version 1 (Component)PBAD Mutant#5
BBa_J202010BBa_J202010 Version 1 (Component)PBAD Mutant#11
BBa_J202003BBa_J202003 Version 1 (Component)PBAD Mutant#4
BBa_J202002BBa_J202002 Version 1 (Component)PBAD Mutant#3
BBa_J202012BBa_J202012 Version 1 (Component)PBAD Mutant#13
BBa_J202009BBa_J202009 Version 1 (Component)PBAD Mutant#10
BBa_J202006BBa_J202006 Version 1 (Component)PBAD Mutant#7
BBa_K535004BBa_K535004 Version 1 (Component)NifH promoter -> Rhizobium etli
BBa_K1796006BBa_K1796006 Version 1 (Component)Dinitrogenase reductase(nifH)