iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
cI lamBBa_R0051 Version 1 (Component)promoter (lambda cI regulated)
cI lamBBa_C0051 Version 1 (Component)cI repressor from E. coli phage lambda (+LVA)
lacI+pLBBa_R0011 Version 1 (Component)Promoter (lacI regulated, lambda pL hybrid)
cI+luxRBBa_R0065 Version 1 (Component)Promoter (lambda cI and luxR regulated -- hybrid)
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
cI 434BBa_C0052 Version 1 (Component)cI repressor from phage 434 (+LVA)
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
cI lamBBa_R1051 Version 1 (Component)Promoter, Standard (lambda cI regulated)<br>
BBa_I9111BBa_I9111 Version 1 (Component)test (lambda-cI nor) I9110.I9109.I9109
BBa_P0451BBa_P0451 Version 1 (Component)PoPS -> cI (lambda) [S0153]
luxrBBa_C0062 Version 1 (Component)luxR repressor/activator, (no LVA?)
BBa_I9108BBa_I9108 Version 1 (Component)test (tp901-cI nor) I9107.I9106.I9106
Prm +BBa_I12006 Version 1 (Component)Modified lamdba Prm promoter (repressed by 434 cI)
cI 434BBa_R0052 Version 1 (Component)Promoter (434 cI regulated)
Prm +BBa_I12007 Version 1 (Component)Modified lambda Prm promoter (OR-3 obliterated)
cI HK022BBa_C0050 Version 1 (Component)cI repressor from phage HK022 (+LVA?)
//testtest Version 1 (Collection) BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
cIBBa_I9200 Version 1 (Component)cI lambda
BBa_P0151BBa_P0151 Version 1 (Component)PoPS -> cI (lambda) [S0165]
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
BBa_I9101BBa_I9101 Version 1 (Component)test (mnt QPI) I0500.E0422.I0500.I9001.E0432
BBa_I9109BBa_I9109 Version 1 (Component)test (lambda-cI nor_input) I0500.E0422.I0500.I9009
//test1test1 Version 1 (Collection) luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
pLambda+RFBBa_I763007 Version 1 (Component)promoter lambda (cI regulated) with RFP reporter
BBa_S03185BBa_S03185 Version 1 (Component)B0015.I6109
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
YbfPBO_9109 Version 1 (Component) cI HK022BBa_R0050 Version 1 (Component)Promoter (HK022 cI regulated)
BBa_K648029BBa_K648029 Version 1 (Component)OR, operating region for Lambda switch
BBa_C0056BBa_C0056 Version 1 (Component)cI repressor from phage 434 (no LVA)
BBa_I9009BBa_I9009 Version 1 (Component)nor_input (lambda-cI) B0034.I9200.B0015
PESTBBa_J176018 Version 1 (Component)PEST
BBa_I7109BBa_I7109 Version 1 (Component)R0053.E0240
BBa_I9104BBa_I9104 Version 1 (Component)test (lambda cI QPI) I0500.E0422.I0500.I9004.E0432
BBa_K1343021BBa_K1343021 Version 1 (Component)Plux->amilCP->lambda CI
cI TP901BBa_C0075 Version 1 (Component)TP901 cI repressor from phage TP901-1 (+LVA)
cI857BBa_J06503 Version 1 (Component)Lambda cI857 (Lambda II) (RBS- LVA+)
BBa_I12024BBa_I12024 Version 1 (Component)Lambda cI Generator (PLlac 0-1 promoter )
BBa_K1333200BBa_K1333200 Version 1 (Component)lambda cI-LGF2(E75A)
BBa_K1333201BBa_K1333201 Version 1 (Component)lambda cI-LGF2(D78A)
BBa_K228236BBa_K228236 Version 1 (Component)cI->Terminator