Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

ACS Synbio Generation
ACS_Synbio_Generation Version 1 (Activity)
Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project

iGEM to SBOL conversion
igem2sbol Version 1 (Activity)
Conversion of the iGEM parts registry to SBOL2.1

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Composite Sequence Pull
Composite Version 1 (Activity)
When multiple sources where combined to make a new part.

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

mCherry
BBa_J06504 Version 1 (Component)
monomeric RFP optimized for bacteria

BBa_J11031
BBa_J11031 Version 1 (Component)
Bacterial Whiteboard by Hannah (w/ Minimal Available Parts)

BBa_J04031
BBa_J04031 Version 1 (Component)
GFP w/LVA tag

B_whiteboa
BBa_J11030 Version 1 (Component)
Bacterial Whiteboard by Hannah

mCherry
BBa_J06702 Version 1 (Component)
mCherry, bacterial with RBS and forward terminator

mCherry
BBa_J06505 Version 1 (Component)
monomeric RFP optimized for bacteria

Prm +
BBa_I12006 Version 1 (Component)
Modified lamdba Prm promoter (repressed by 434 cI)

mnt (w)
BBa_C0073 Version 1 (Component)
mnt repressor (weak) from Salmonella phage P22 (+LVA)

BBa_K209402
BBa_K209402 Version 1 (Component)
AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]

BBa_S03119
BBa_S03119 Version 1 (Component)
--Specify Parts List--

BBa_I13001
BBa_I13001 Version 1 (Component)
RBS B0030 w/ YFP (-LVA) TT

BBa_I13002
BBa_I13002 Version 1 (Component)
RBS B0031 w/ YFP (-LVA) TT

BBa_I763026
BBa_I763026 Version 1 (Component)
LacI coding device regulated by pTetR

BBa_K117000
BBa_K117000 Version 1 (Component)
Lysis gene (promotes lysis in colicin-producing bacteria strain)

p(osmY)
BBa_J45993 Version 1 (Component)
Minimal stationary phase osmY promoter

BBa_J69704
BBa_J69704 Version 1 (Component)
Available Part Name

BBa_J69703
BBa_J69703 Version 1 (Component)
Available Part Name

BBa_J69706
BBa_J69706 Version 1 (Component)
Available Part Name

BBa_J69705
BBa_J69705 Version 1 (Component)
Available Part Name

BBa_J06602
BBa_J06602 Version 1 (Component)
Construction Intermediate: mCherry, bacterial with RBS (B0034.J06504)

BBa_J70042
BBa_J70042 Version 1 (Component)
6his part for use with BioScaffold parts ATG-6his-GGATCC (glycine serine)

TATA
BBa_M45406 Version 1 (Component)
minimal TATA Box

BBa_K105027
BBa_K105027 Version 1 (Component)
cyc100 minimal promoter

pUC19 ori
BBa_I50022 Version 1 (Component)
Minimal pUC19-derived high copy replication origin

BBa_K1440088
BBa_K1440088 Version 1 (Component)
long parts consist of part2 and part3

BBa_K209400
BBa_K209400 Version 1 (Component)
AarI B-C part, hM4D

pSB1A2
pSB1A2 Version 1 (Component)
pSB1A2 (Replaced by pSB1A3)

BBa_K819013
BBa_K819013 Version 1 (Component)
ahanah

BBa_J70044
BBa_J70044 Version 1 (Component)
6his part for use with BioScaffold parts (G)GATCC(glycine serine)-6his-TAA

BBa_K209017
BBa_K209017 Version 1 (Component)
Aar1 C-D part, PTEN w/o N (Dictyostelium discoideum)

BBa_K322149
BBa_K322149 Version 1 (Component)
Bacterial luciferase (luxAB) blue shifted by lumazine protein

M-B
BBa_K774001 Version 1 (Component)
Mammalian-Bacterial Promoter: E9-ns2 CArG promoter sequence + BHN + BBaK216005

BBa_J24683
BBa_J24683 Version 1 (Component)
4. W RBS - LacI

BBa_J24686
BBa_J24686 Version 1 (Component)
7. W RBS - TetR

BBa_K414005
BBa_K414005 Version 1 (Component)
ccdB minimal gene

pUC19 ori
BBa_I50020 Version 1 (Component)
Minimal pUC19-derived high copy replication origin

Pcar
BBa_K861171 Version 1 (Component)
Pcar, synthetic promoter repressed by CRP

BBa_K2040200
BBa_K2040200 Version 1 (Component)
Minimal PgpdA

BBa_J24714
BBa_J24714 Version 1 (Component)
34. pLacI=W RBS=AraC=W RBS=TetR=S RBS=mCherry(+LVA)=terminator

BBa_J25010
BBa_J25010 Version 1 (Component)
mCherry (+lva) controlled by OmpR (good reporter w/ photosystem)

B-M
BBa_K774000 Version 1 (Component)
Bacterial-Mammalian Promoter: BBaK216005 + BHN + CArG promoter sequence E9-ns2

BBa_K165016
BBa_K165016 Version 1 (Component)
mCYC1 minimal yeast promoter