Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Unknown Alteration Sequence Pull
Unknown Version 1 (Activity)
Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown

lux pR
BBa_R0062 Version 1 (Component)
Promoter (luxR & HSL regulated -- lux pR)

luxI
BBa_C0061 Version 1 (Component)
autoinducer synthetase for AHL

luxr
BBa_C0062 Version 1 (Component)
luxR repressor/activator, (no LVA?)

lux pL
BBa_R0063 Version 1 (Component)
Promoter (luxR & HSL regulated -- lux pL)<br>

cI+luxR
BBa_R0065 Version 1 (Component)
Promoter (lambda cI and luxR regulated -- hybrid)

luxI
BBa_C0161 Version 1 (Component)
autoinducer synthetase for AHL (no LVA)

BBa_C0261
BBa_C0261 Version 1 (Component)
AHL-making Enzyme, luxI (+RBS)

LuxR
BBa_I0462 Version 1 (Component)
luxR Protein Generator

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

hixC
BBa_J44000 Version 1 (Component)
hixC binding site for Salmonella typhimurium Hin recombinase

His-Stop
BBa_K133133 Version 1 (Component)
His affinity tag-stop

BBa_K546000
BBa_K546000 Version 1 (Component)
Lux pL controlled LuxR with lux pR autoinducing LuxI(lva tag)- AHL.

BBa_J09855
BBa_J09855 Version 1 (Component)
Constitutive luxR device with pLuxR

RGD-His-St
BBa_K133036 Version 1 (Component)
RGD-His affinity tag-Stop

lux pR
BBa_R1062 Version 1 (Component)
Promoter, Standard (luxR and HSL regulated -- lux pR)<br>

BBa_K844000
BBa_K844000 Version 1 (Component)
10x-Histidine (10x-His) Tag with double stop codon (TAATAA)

Hin
BBa_J31000 Version 1 (Component)
DNA-invertase Hin from Salmonella typhimurium

His
BBa_K157011 Version 1 (Component)
His affinity tag; Freiburg standard

BBa_K228011
BBa_K228011 Version 1 (Component)
LuxR-LuxP-SupD

luxR
BBa_R0061 Version 1 (Component)
Promoter (HSL-mediated luxR repressor)

BBa_K805016
BBa_K805016 Version 1 (Component)
LuxI

RE
BBa_J3101 Version 1 (Component)
Recombinational Enhancer (RE) for Hin/Hix inverting

BBa_K116634
BBa_K116634 Version 1 (Component)
RBS + LuxR + RBS + LuxI + T

BBa_B0053
BBa_B0053 Version 1 (Component)
Terminator (His)

BBa_K546003
BBa_K546003 Version 1 (Component)
Lux pL controlled LuxR + lux pR promoter.

LuxI-His
BBa_K1709000 Version 1 (Component)
LuxI-His

His-Scaffo
BBa_K1602027 Version 1 (Component)
Protein scaffold with N-terminal HisTag

BBa_K176028
BBa_K176028 Version 1 (Component)
TetR repressible AHL->PoPS Receiver (Very High LuxR): pCon 0.70->luxR+pLux/Tet->PoPS

BBa_K091109
BBa_K091109 Version 1 (Component)
LuxS

TD0.01
BBa_K750012 Version 1 (Component)
TIME DELAY0.01:LuxI(RBS0.01)->LuxR->LuxPR->GFP

TD1.0
BBa_K750009 Version 1 (Component)
TIME DELAY1.0:LuxI(RBS1.0)->LuxR->LuxPR->GFP

BBa_K081008
BBa_K081008 Version 1 (Component)
luxI protein generator (TERM-)

BBa_K1709001
BBa_K1709001 Version 1 (Component)
LuxI-His

pLux/Tet
BBa_K176000 Version 1 (Component)
pLux/Tet Hybrid Promoter: (LuxR+,TetR-)->PoPS

BBa_K1897015
BBa_K1897015 Version 1 (Component)
LuxR + LuxI

IR-GFP
BBa_K658016 Version 1 (Component)
LuxI->LuxR->lux pR->GFP

BBa_K176085
BBa_K176085 Version 1 (Component)
cell density->PoPS: pCon 0.15->luxI-LVA+pCon 0.70->luxR+pLux/Tet->PoPS

TD0.6
BBa_K750010 Version 1 (Component)
TIME DELAY 0.6:LuxI(RBS0.6)->LuxR->LuxPR->GFP

BBa_K1520504
BBa_K1520504 Version 1 (Component)
Rbs-luxI(scarless)

BBa_K658018
BBa_K658018 Version 1 (Component)
LuxI->LuxR->lux pR-5->GFP

IR-3-GFP
BBa_K658017 Version 1 (Component)
LuxI->LuxR->lux pR-3->GFP

eGFP+His
BBa_K193202 Version 1 (Component)
EGFP(enhanced Green Fluorescent Protein) with His tag

BBa_K1725213
BBa_K1725213 Version 1 (Component)
LuxC + LuxD both with B0032

LuxI
BBa_K092400 Version 1 (Component)
LuxI with RBS and Terminator

His6
BBa_K1362431 Version 1 (Component)
N-terminal His6 (C-Intein)