iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B1001BBa_B1001 Version 1 (Component)Terminator (artifical, small, %T~=90)
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
BBa_M11054BBa_M11054 Version 1 (Component)eugenol O-methyltransferase (IEMT1) for floral smell biosynthesis
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
FurBO_11498 Version 1 (Component) hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_M11053BBa_M11053 Version 1 (Component)linalool synthase for floral smell biosynthesis (LIS)
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
BBa_B1002BBa_B1002 Version 1 (Component)Terminator (artificial, small, %T~=85%)
BBa_J70029BBa_J70029 Version 1 (Component)RBS + mCherry gene, optimized for expression in Me. florum and E. coli
Cpn10BBa_K538000 Version 1 (Component)Cpn10 (O. antarctica)
BBa_K814002BBa_K814002 Version 1 (Component)dehydroquinate O-methyltrasferase (O-MT) generator
BBa_K874000BBa_K874000 Version 1 (Component)M.ScaI Methyltransferase
BBa_I769104BBa_I769104 Version 1 (Component)Feruloyl CoA hydratase for vanillin biosythesis
BBa_K2007002BBa_K2007002 Version 1 (Component)Drosophila melanogaster Juvenile Hormone Acid O-methyltransferase (DmJHAMT)
BBa_K1839001BBa_K1839001 Version 1 (Component)Ava_3857 O-methyltransferase (O-MT)
rhIIBBa_C0070 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL
SAMmtBBa_K1312005 Version 1 (Component)S-adenosyl methionine-dependent methyltransferase relate to Met-DMSP byosynthesis pathway(SAMmt)
BBa_K801070BBa_K801070 Version 1 (Component)xanthosine methyltransferase CaXMT1-strep
BBa_J23008BBa_J23008 Version 1 (Component)[key3c] riboregulator for lock3 variants
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
scarBBa_G0000 Version 1 (Component)SpeI/XbaI scar for RBS-CDS junctions
Cpn60BBa_K538001 Version 1 (Component)Cpn60 (O. antarctica)
Subtilin PBBa_K104001 Version 1 (Component)Sensor for small peptide Subtilin
BBa_K801098BBa_K801098 Version 1 (Component)O-methyltransferase 1 (OMT1) coding region
loxBBa_J61046 Version 1 (Component)[Lox] site for recombination
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_K801072BBa_K801072 Version 1 (Component)3,7-dimethylxanthine N-methyltransferase CaDXMT1-strep
BBa_K801071BBa_K801071 Version 1 (Component)7-methylxanthine N-methyltransferase CaMXMT1-strep
RcsBBBa_K200000 Version 1 (Component)Colanic acid global regulator -> RcsB
BAMTBBa_J45002 Version 1 (Component)SAM:benzoic acid carboxyl methyltransferase; converts benzoic acid to methyl benzoate (floral odor)
BBa_B1005BBa_B1005 Version 1 (Component)Terminator (artificial, small, %T~=25%
BBa_K801097BBa_K801097 Version 1 (Component)Chalcone O-methyltransferase (OMT1) + yeast consensus sequence
BBa_K177026BBa_K177026 Version 1 (Component)listeriolysin O 399G->C - locus from Listeria monocytogenes
BBa_K1129044BBa_K1129044 Version 1 (Component)Caffeic acid-o-methyltransferase under arabinose promoter
mCherryBBa_J06505 Version 1 (Component)monomeric RFP optimized for bacteria
RBS-spoVGBBa_K143021 Version 1 (Component)SpoVG ribosome binding site (RBS) for B. subtilis
BSMT1BBa_J45004 Version 1 (Component)SAM:benzoic acid/salicylic acid carboxyl methyltransferase I; converts salicylic acid to methyl sali