Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
BBa_J04450BBa_J04450 Version 1 (Component)RFP Coding Device
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
mRFPrBBa_J31008 Version 1 (Component)RFP reverse
mRFP1BBa_I13502 Version 1 (Component)Screening plasmid intermediate
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
His-StopBBa_K133133 Version 1 (Component)His affinity tag-stop
RGD-His-StBBa_K133036 Version 1 (Component)RGD-His affinity tag-Stop
mRFPBBa_K1615089 Version 1 (Component)mRFP RFC25
mRFP1BBa_E2050 Version 1 (Component)derivative of mRFP1, yeast-optimized
BBa_K081014BBa_K081014 Version 1 (Component)RFP protein generator - PoPS->RFP
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
BBa_I13521BBa_I13521 Version 1 (Component)Ptet mRFP
mRFP sel.BBa_K1362422 Version 1 (Component)mRFP selection marker with outward BsaI restriction sites
HinBBa_J31000 Version 1 (Component)DNA-invertase Hin from Salmonella typhimurium
HisBBa_K157011 Version 1 (Component)His affinity tag; Freiburg standard
REBBa_J3101 Version 1 (Component)Recombinational Enhancer (RE) for Hin/Hix inverting
mRFP1BBa_J04650 Version 1 (Component)E1010.B0015
BBa_B0053BBa_B0053 Version 1 (Component)Terminator (His)
His-ScaffoBBa_K1602027 Version 1 (Component)Protein scaffold with N-terminal HisTag
BBa_K199118BBa_K199118 Version 1 (Component)T7 promoter + RBS + RFP
RFP2BBa_I715023 Version 1 (Component)Carboxyl portion of RFP
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
BBa_I766101BBa_I766101 Version 1 (Component)mCherry/RFP
RFP1BBa_I715022 Version 1 (Component)Amino Portion of RFP
mCherryBBa_J06505 Version 1 (Component)monomeric RFP optimized for bacteria
BBa_K1319020BBa_K1319020 Version 1 (Component)Translational unit of mRFP-galectin3-his
BBa_K1051000BBa_K1051000 Version 1 (Component)Stop codon free RFP in RFC[23] standard
eGFP+HisBBa_K193202 Version 1 (Component)EGFP(enhanced Green Fluorescent Protein) with His tag
mCherryBBa_E2060 Version 1 (Component)derivative of mRFP1, yeast-optimized
BBa_J61002BBa_J61002 Version 1 (Component)EX-Ptet-S-rbsRFP-P "RFP reporter"
His6BBa_K1362431 Version 1 (Component)N-terminal His6 (C-Intein)
BBa_K516030BBa_K516030 Version 1 (Component)mRFP protein generator TERM+ RBS+(B0030)
HisBBa_K128005 Version 1 (Component)His affinity tag
BclA-HisBBa_K1933000 Version 1 (Component)N-terminal domain of BclA protein fused to 6xHis tag
mRFP1BBa_I13503 Version 1 (Component)Screening plasmid intermediate
HisBBa_M0021 Version 1 (Component)Poly-His affinity tag
Hin LVABBa_J31001 Version 1 (Component)DNA invertase Hin tagged with LVA
His-Sc_Si4BBa_K1602030 Version 1 (Component)HisTag-Scaffold_Si4-Tag fusion protein
mRFPBBa_J5526 Version 1 (Component)LacI -| mRFP
SbpA | RFPBBa_K525404 Version 1 (Component)Fusion Protein of S-Layer SbpA and mCherry RFP
BBa_K1319009BBa_K1319009 Version 1 (Component)mRFP-gal3-his fusion protein CDS