iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
BBa_B0012BBa_B0012 Version 1 (Component)TE from coliphageT7
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0015BBa_B0015 Version 1 (Component)double terminator (B0010-B0012)
BBa_B0034BBa_B0034 Version 1 (Component)RBS (Elowitz 1999) -- defines RBS efficiency
BBa_B0010BBa_B0010 Version 1 (Component)T1 from E. coli rrnB
GFPBBa_E0040 Version 1 (Component)green fluorescent protein derived from jellyfish Aequeora victoria wild-type GFP (SwissProt: P42212
p(tetR)BBa_R0040 Version 1 (Component)TetR repressible promoter
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
LacIBBa_R0010 Version 1 (Component)promoter (lacI regulated)
tetRBBa_C0040 Version 1 (Component)tetracycline repressor from transposon Tn10 (+LVA)
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
lacI+pLBBa_R0011 Version 1 (Component)Promoter (lacI regulated, lambda pL hybrid)
BBa_B0030BBa_B0030 Version 1 (Component)RBS.1 (strong) -- modified from R. Weiss
pBad/araCBBa_I0500 Version 1 (Component)Inducible pBad/araC promoter
lux pRBBa_R0062 Version 1 (Component)Promoter (luxR & HSL regulated -- lux pR)
cI lamBBa_R0051 Version 1 (Component)promoter (lambda cI regulated)
BBa_B0014BBa_B0014 Version 1 (Component)double terminator (B0012-B0011)
eyfpBBa_E0030 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
BBa_I13453BBa_I13453 Version 1 (Component)Pbad promoter
BBa_J61101BBa_J61101 Version 1 (Component)Ribosome Binding Site Family Member
BBa_B0011BBa_B0011 Version 1 (Component)LuxICDABEG (+/-)
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
pBADBBa_K206000 Version 1 (Component)pBAD strong
tetRBBa_Q04400 Version 1 (Component)QPI (B0034.C0040.B0015.R0040)
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
GFP reportBBa_E0240 Version 1 (Component)GFP generator
BBa_E0430BBa_E0430 Version 1 (Component)EYFP (RBS+ LVA- TERM) (B0034.E0030.B0015)
ecfpBBa_E0020 Version 1 (Component)engineered cyan fluorescent protein derived from A. victoria GFP
BBa_J61120BBa_J61120 Version 1 (Component)Ribosome Binding Site Family Member
BBa_K598012BBa_K598012 Version 1 (Component)pBAD+TPP Up-regulated Hammerhead Ribozyme 1.20 with Native RBS+E0040+B0015
BBa_K598008BBa_K598008 Version 1 (Component)TPP Up-regulated Hammerhead Ribozyme 1.20 with Native RBS+E0040+B0015
BBa_K864400BBa_K864400 Version 1 (Component)Ptac, trp & lac regulated promoter
LasR+PAIBBa_R0079 Version 1 (Component)Promoter (LasR & PAI regulated)
GFP generaBBa_E0840 Version 1 (Component)GFP generator
cI+luxRBBa_R0065 Version 1 (Component)Promoter (lambda cI and luxR regulated -- hybrid)
Scar 25BBa_B0105 Version 1 (Component)RFC 25 Scar Sequence
BBa_E0420BBa_E0420 Version 1 (Component)ECFP (RBS+ LVA- TERM) (B0034.E0020.B0015)
BBa_K598011BBa_K598011 Version 1 (Component)pBAD+TPP Down-regulated Hammerhead Ribozyme 2.5 with Native RBS+E0040+B0015
BBa_K598000BBa_K598000 Version 1 (Component)TPP Down-regulated Hammerhead Ribozyme 2.5 with Native RBS+E0040+B0015
BBa_K598020BBa_K598020 Version 1 (Component)B0015+pBAD+vioAB+B0015+pBAD+TPP Up-regulated Hammerhead Ribozyme 1.20+vioD+B0015+pBAD+vioE
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.