SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

BBa_B0034
BBa_B0034 Version 1 (Component)
RBS (Elowitz 1999) -- defines RBS efficiency

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

LacI
BBa_R0010 Version 1 (Component)
promoter (lacI regulated)

lacI
BBa_C0012 Version 1 (Component)
lacI repressor from E. coli (+LVA)

BBa_B0030
BBa_B0030 Version 1 (Component)
RBS.1 (strong) -- modified from R. Weiss

BBa_B0032
BBa_B0032 Version 1 (Component)
RBS.3 (medium) -- derivative of BBa_0030

lacI+pL
BBa_R0011 Version 1 (Component)
Promoter (lacI regulated, lambda pL hybrid)

BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030

mRFP1
BBa_E1010 Version 1 (Component)
**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)

pT7
BBa_I719005 Version 1 (Component)
T7 Promoter

pT7
BBa_K525998 Version 1 (Component)
Promoter T7 and RBS

BBa_I712074
BBa_I712074 Version 1 (Component)
T7 promoter (strong promoter from T7 bacteriophage)

BBa_B0016
BBa_B0016 Version 1 (Component)
Terminator (T7 RNAP specific, T_Phi)

T7 RBS
BBa_K1362090 Version 1 (Component)
strong T7 RBS

BBa_J04500
BBa_J04500 Version 1 (Component)
IPTG inducible promoter with RBS

BBa_B0033
BBa_B0033 Version 1 (Component)
RBS.4 (weaker) -- derivative of BBa_0030

BBa_K2066018
BBa_K2066018 Version 1 (Component)
UNS 2 Sequence, from Torella et al., 2013

BBa_I2032
BBa_I2032 Version 1 (Component)
T7 RNA polymerase

BBa_J119056
BBa_J119056 Version 1 (Component)
pLacI-RBS-T7 RNAP (2SAT mutant 2)

lacI
BBa_Q04121 Version 1 (Component)
QPI (B0034.C0012.B0015.R0011)

BBa_J119060
BBa_J119060 Version 1 (Component)
pLacI-RBS-T7 RNAP (2SAT mutant 6)

BBa_J119057
BBa_J119057 Version 1 (Component)
pLacI-RBS-T7 RNAP (2SAT mutant 3)

BBa_J119058
BBa_J119058 Version 1 (Component)
pLacI-RBS-T7 RNAP (2SAT mutant 4)

BBa_J119055
BBa_J119055 Version 1 (Component)
pLacI-RBS-T7 RNAP (2SAT mutant 1)

BBa_K199118
BBa_K199118 Version 1 (Component)
T7 promoter + RBS + RFP

LacI
BBa_I732100 Version 1 (Component)
LacI

BBa_J119059
BBa_J119059 Version 1 (Component)
pLacI-RBS-T7 RNAP (2SAT mutant 5)

RBS-RFP
BBa_K093005 Version 1 (Component)
RFP with RBS

BBa_R0182
BBa_R0182 Version 1 (Component)
T7 RNAP promoter

BBa_C0261
BBa_C0261 Version 1 (Component)
AHL-making Enzyme, luxI (+RBS)

BBa_K1321338
BBa_K1321338 Version 1 (Component)
T7 Expression vector

RBS-spoVG
BBa_K143021 Version 1 (Component)
SpoVG ribosome binding site (RBS) for B. subtilis

BBa_J119068
BBa_J119068 Version 1 (Component)
RFPrev-RBSrev-pT7rev-pLacI-RBS-T7 RNAP (2SAT mutant 1)

BBa_J52008
BBa_J52008 Version 1 (Component)
luciferase: luciferin 2-monooxygenase from Renilla reniformis (EC 1.13.12.5; SwissProt:: P27652)

BBa_I732820
BBa_I732820 Version 1 (Component)
LacI (RBS+, TERM+)

BBa_J44001
BBa_J44001 Version 1 (Component)
Reverse RBS (RBS_rev) -- corresponds to BBa_B0030

BBa_P0412
BBa_P0412 Version 1 (Component)
PoPS -> LacI [S0150]

BBa_R0184
BBa_R0184 Version 1 (Component)
T7 promoter (lacI repressible)

BBa_J119063
BBa_J119063 Version 1 (Component)
pT7-RBS-GFP-TT-pLacI-RBS-T7 RNAP (mutant 2)

BBa_E0430
BBa_E0430 Version 1 (Component)
EYFP (RBS+ LVA- TERM) (B0034.E0030.B0015)

BBa_K784043
BBa_K784043 Version 1 (Component)
Mutant T7 RNAP - T7*