SynBioHub

Public

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Public

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Public

GFP report
BBa_E0240 Version 1 (Component)
GFP generator

Public

TnrA
BO_11240 Version 1 (Component)

Public

BBa_K130002
BBa_K130002 Version 1 (Component)
torA export

Public

MorA
BBa_K1615000 Version 1 (Component)
Morphine-6-dehydrogenase RFC25

Public

BBa_K233307
BBa_K233307 Version 1 (Component)
TorA- This part is a export tag that utilizes the Twin Arginine Transport pathway(TAT)

Public

BBa_K208005
BBa_K208005 Version 1 (Component)
TorA Signal Peptide - Silver Fusion Compatible

Public

BBa_K638401
BBa_K638401 Version 1 (Component)
Arabinose inducible TorA Export Tagged Reflectin A1 Poly His generator

Public

BBa_K1378023
BBa_K1378023 Version 1 (Component)
TorA-MlrA

Public

BBa_K797002
BBa_K797002 Version 1 (Component)
TorA signal with RBS

Public

BBa_K1978002
BBa_K1978002 Version 1 (Component)
TorA-RFP

Public

BBa_K1978000
BBa_K1978000 Version 1 (Component)
TorA-BtuF

Public

BBa_K1202104
BBa_K1202104 Version 1 (Component)
TorA GFP

Public

BBa_K1978001
BBa_K1978001 Version 1 (Component)
TorA-GlmS

Public

BBa_K233008
BBa_K233008 Version 1 (Component)
TorA-GFP

Public

BBa_K1202004
BBa_K1202004 Version 1 (Component)
TorA signal peptide

Public

BBa_K638402
BBa_K638402 Version 1 (Component)
TorA tag variant

Public

BBa_K2019003
BBa_K2019003 Version 1 (Component)
Periplasm Directed saCas9 via TorA Signaling Sequence (TorA-saCas9)

Public

BBa_K1378026
BBa_K1378026 Version 1 (Component)
TorA-MlrA-Terminator

Public

BBa_K208028
BBa_K208028 Version 1 (Component)
TorA/GFP/Terminator

Public

BBa_K208027
BBa_K208027 Version 1 (Component)
TorA/PhaP/Terminator

Public

BBa_K233001
BBa_K233001 Version 1 (Component)
Snowdrift 1 , using TorA. A module to secrete B-galactosidase using the TAT-export Pathway

Public

TopA
BO_9392 Version 1 (Component)

Public

BBa_K130004
BBa_K130004 Version 1 (Component)
YcdO Export

Public

sp310mut2
BBa_K372003 Version 1 (Component)
Export tag

Public

BBa_K130005
BBa_K130005 Version 1 (Component)
YcdB Export

Public

BBa_K130003
BBa_K130003 Version 1 (Component)
YcbK export

Public

DsbA
BBa_K243002 Version 1 (Component)
DsbA signal sequence (enables periplasm export)

Public

tyrA
BO_32391 Version 1 (Component)

Public

yorA
BO_29979 Version 1 (Component)

Public

TyrA
BO_26455 Version 1 (Component)

Public

YorA
BO_2213 Version 1 (Component)

Public

thrA
BO_32945 Version 1 (Component)

Public

tnrA
BO_32307 Version 1 (Component)

Public

BBa_K797009
BBa_K797009 Version 1 (Component)
Plasmid include TorA-R9 signal region

Public

BBa_K1012002
BBa_K1012002 Version 1 (Component)
The TorA twin-arginine signal sequence

Public

BBa_K638403
BBa_K638403 Version 1 (Component)
Arabinose inducible TorA-Reflectin A1-sfGFP generator

Public

Dioxy
BBa_K1688022 Version 1 (Component)
Catechol 1,2 Dioxygenase + HlyA export tag

Public

BBa_B0051
BBa_B0051 Version 1 (Component)
Terminator (yciA/tonA, +/-)

Public

BBa_K208048
BBa_K208048 Version 1 (Component)
Lac Promoter/RBS/TorA/Phasin/Term

Public

BBa_K208049
BBa_K208049 Version 1 (Component)
Lac Promoter/RBS/TorA/GFP/Term

Public

BBa_K208050
BBa_K208050 Version 1 (Component)
Tet Promoter/RBS/TorA/Phasin/Terminator

Public

BBa_K208051
BBa_K208051 Version 1 (Component)
Tet Promoter/RBS/TorA/GFP/Terminator

Public

BBa_K563011
BBa_K563011 Version 1 (Component)
Tor2 with L1415P mutation

Public

PKI NES
BBa_J63007 Version 1 (Component)
PKI nuclear export sequence; yeast codon optimized

Public

BBa_K2064001
BBa_K2064001 Version 1 (Component)
TyrA Donor COM

Public

BBa_K804003
BBa_K804003 Version 1 (Component)
TyrA coding gene

Public

HSL report
BBa_K1913014 Version 1 (Component)
3-oxo-hexanoyl-HSL GFP reporter

Public

BBa_K563010
BBa_K563010 Version 1 (Component)
Tor2 gene from the genome of the S. cerevisiae, central protein in TOR(target of rapamycin) pathway

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