Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_I13507BBa_I13507 Version 1 (Component)Screening plasmid intermediate
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
BBa_I13504BBa_I13504 Version 1 (Component)Screening plasmid intermediate
BBa_J85600BBa_J85600 Version 1 (Component)attB1 recombination site
BBa_K1945002BBa_K1945002 Version 1 (Component)Homologous Recombination Intermediate for Counter-selection in Synechocystis sp. PCC 6803
BBa_K390001BBa_K390001 Version 1 (Component)5'UTR and native RBS from psbA2 in Synechocystis sp. PCC 6803
BBa_K390002BBa_K390002 Version 1 (Component)5'UTR and consensus RBS from psbA2 in Synechocystis sp. PCC 6803
BBa_I15008BBa_I15008 Version 1 (Component)heme oxygenase (ho1) from Synechocystis
BBa_I15009BBa_I15009 Version 1 (Component)phycocyanobilin:ferredoxin oxidoreductase (PcyA) from synechocystis
loxBBa_J61046 Version 1 (Component)[Lox] site for recombination
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_K1945001BBa_K1945001 Version 1 (Component)Homologous Recombination Plasmid for Synechocystis sp. PCC 6803
BBa_K1424000BBa_K1424000 Version 1 (Component)Prefix homologous recombination for Synechocystis ("Left flank")
FurBO_11498 Version 1 (Component) CouplingCoupling Version 1 (Component)Translational coupler
BBa_K1476003BBa_K1476003 Version 1 (Component)PsaD deletion for Synechocystis sp. PCC 6803
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_K390003BBa_K390003 Version 1 (Component)pilA secretion tag for Synechocystis sp. PCC 6803
BBa_K390004BBa_K390004 Version 1 (Component)art+ secretion tag for Synechocystis sp. PCC 6803
BBa_K1476000BBa_K1476000 Version 1 (Component)PilT1 knockout for Synechocystis sp. PCC 6803
BBa_I13500BBa_I13500 Version 1 (Component)Screening plasmid intermediate
mRFP1BBa_I13502 Version 1 (Component)Screening plasmid intermediate
BBa_K390007BBa_K390007 Version 1 (Component)sigE Type II promoter from Synechocystis sp. PCC 6803
BBa_K390011BBa_K390011 Version 1 (Component)glnBP2 Type II promoter from Synechocystis sp. PCC 6803
BBa_K390012BBa_K390012 Version 1 (Component)pilA1 Type III promoter from Synechocystis sp. PCC 6803
BBa_K390010BBa_K390010 Version 1 (Component)hspA Type I Promoter from Synechocystis sp. PCC 6803
BBa_K390008BBa_K390008 Version 1 (Component)lrtA Type II promoter from Synechocystis sp. PCC 6803
BBa_K390009BBa_K390009 Version 1 (Component)sigF Type III promoter from Synechocystis sp. PCC 6803
BBa_K390006BBa_K390006 Version 1 (Component)sigA Type I promoter from Synechocystis sp. PCC 6803
BBa_K390005BBa_K390005 Version 1 (Component)psbA2 Type I promoter from Synechocystis sp. PCC 6803
BBa_K1476001BBa_K1476001 Version 1 (Component)PilA1 from Synechocystis sp. PCC 6803
BBa_M11400BBa_M11400 Version 1 (Component)Integration Plasmid for Synechocystis sp. PCC 6803
BBa_K1476004BBa_K1476004 Version 1 (Component)petF from Synechocystis sp. PCC 6803
REBBa_J3101 Version 1 (Component)Recombinational Enhancer (RE) for Hin/Hix inverting
RS1BBa_K743000 Version 1 (Component)Synechocystis PCC6803 neutral recombination site.
BBa_K390300BBa_K390300 Version 1 (Component)pSB1A3_IntC6803 - Synechocystis sp. PCC 6803 Integration Plasmid with CmR
BBa_K1476002BBa_K1476002 Version 1 (Component)petH mutant for Synechocystis sp. 6803
BBa_K906201BBa_K906201 Version 1 (Component)Psl2131 (for Synechocystis homologous recombination)
BBa_K390062BBa_K390062 Version 1 (Component)GFP with art+ secretion tag for Synechocystis sp. PCC 6803
BBa_K390061BBa_K390061 Version 1 (Component)GFP with pilA secretion tag for Synechocystis sp. PCC 6803
BBa_K1424001BBa_K1424001 Version 1 (Component)Suffix homologous recombination for Synechocystis ("Right flank")
BBa_M11406BBa_M11406 Version 1 (Component)Type 1 promoter of psaAB operon in Synechocystis sp. PCC 6803