Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

iGEM Feature Libraries
igem_feature_libraries_collection Version 1 (Unknown)
A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).

Free Genes Feature Libraries
free_genes_feature_libraries_collection Version 1 (Unknown)
A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).

ACS Synbio Generation
ACS_Synbio_Generation Version 1 (Activity)
Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project

iGEM to SBOL conversion
igem2sbol Version 1 (Activity)
Conversion of the iGEM parts registry to SBOL2.1

SyBiOntKB to SBOL conversion
SyBiOntKB2sbol Version 1 (Activity)
Conversion of the Synthetic Biology Ontology knowledge base to SBOL 2.1

Sequence Cut Out of Plasmid
cut_out_of_plasmid Version 1 (Activity)
Used to indicate that a sequence was cut out of the plasmid referenced as the source

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Unknown Alteration Sequence Pull
Unknown Version 1 (Activity)
Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown

BBa_B0032
BBa_B0032 Version 1 (Component)
RBS.3 (medium) -- derivative of BBa_0030

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_J04500
BBa_J04500 Version 1 (Component)
IPTG inducible promoter with RBS

pBad/araC
BBa_I0500 Version 1 (Component)
Inducible pBad/araC promoter

mRFP1
BBa_E1010 Version 1 (Component)
**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)

OmpR
BBa_R0082 Version 1 (Component)
Promoter (OmpR, positive)

BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030

OmpA
BBa_K103006 Version 1 (Component)
OmpA outer membrane protein A fused to linker; displays proteins on cell surface

BBa_B0033
BBa_B0033 Version 1 (Component)
RBS.4 (weaker) -- derivative of BBa_0030

BBa_K215211
BBa_K215211 Version 1 (Component)
IPTG Inducible 5tmr OmpA Surface Display of WT Streptavidin

BBa_K215210
BBa_K215210 Version 1 (Component)
IPTG Inducible 1tmr OmpA Surface Display of WT Streptavidin

OmpR
BBa_R0084 Version 1 (Component)
Promoter (OmpR, positive)

BBa_J56012
BBa_J56012 Version 1 (Component)
Invertible sequence of dna includes Ptrc promoter

BBa_K215201
BBa_K215201 Version 1 (Component)
Generic Surface Display Construct: IPTG Inducible Lpp + 5tmr OmpA + NheI Site

OmpR
BBa_R0083 Version 1 (Component)
Promoter (OmpR, positive)

BBa_K215261
BBa_K215261 Version 1 (Component)
Lpp + 5tmr OmpA + GS Linker + TEV site + WT Streptavidin + 6His

BBa_K215200
BBa_K215200 Version 1 (Component)
Generic Surface Display Construct: IPTG Inducible Lpp + 1tmr OmpA + NheI Site

pSC101
BBa_I50041 Version 1 (Component)
pSC101 origin of replication, reverse

Ara
BBa_K808000 Version 1 (Component)
araC-Pbad - Arabinose inducible regulatory promoter/repressor unit

BBa_K215260
BBa_K215260 Version 1 (Component)
Lpp + 1tmr OmpA + GS Linker + TEV site + WT Streptavidin + 6His

BBa_J36848
BBa_J36848 Version 1 (Component)
Lac-inducible generator of Lpp-OmpA(46-66)-Streptavidin wild-type + His6tag

BBa_J36850
BBa_J36850 Version 1 (Component)
Lac-inducible generator of Lpp-OmpA(46-159)-Streptavidin wild-type + His6 tag

BBa_K346034
BBa_K346034 Version 1 (Component)
T7p(BBa_I719005)+RBS(B0034)+Lpp-OmpA+MBP(surface display of mercury binding peptide)

BBa_K914003
BBa_K914003 Version 1 (Component)
L-rhamnose-inducible promoter (pRha)

CPX
BBa_I728500 Version 1 (Component)
CPX Terminal Surface Display Protein with Polystyrene-Binding Peptide

BBa_J36846
BBa_J36846 Version 1 (Component)
Lpp-OmpA(46-159)-Streptavidin wild-type + His6

BBa_I728978
BBa_I728978 Version 1 (Component)
Promoter+RBS+CPX(Circularly-Permuted OmpX for Surface Display of Polypeptides)

BBa_K737051
BBa_K737051 Version 1 (Component)
IPTG inducible GFP Generator

BBa_K731520
BBa_K731520 Version 1 (Component)
IPTG inducible GFPmut3b

BBa_K416000
BBa_K416000 Version 1 (Component)
Aga2 CDS Responsible for Yeast Surface Display

BBa_K346029
BBa_K346029 Version 1 (Component)
T7p(BBa_I719005)+RBS(B0034)+Lpp-OmpA+MBP(surface display of lead binding peptide)

BBa_K883001
BBa_K883001 Version 1 (Component)
CCMV wt coat protein under IPTG induced promoter

Ag43+FLAG
BBa_K1352011 Version 1 (Component)
Ag43+FLAG+MCS for surface display of foreign peptides

BBa_K1362060
BBa_K1362060 Version 1 (Component)
OmpA surface protein as RFC[105] N-terminal insert

BBa_K398206
BBa_K398206 Version 1 (Component)
AlnA generator (IPTG inducible)

BBa_K1319042
BBa_K1319042 Version 1 (Component)
IPTG inducible iLOV

BBa_K1638003
BBa_K1638003 Version 1 (Component)
T25 domain of <i>cyaA</i> from <i>Bordetella pertussis</i> (IPTG inducible)

BBa_K731400
BBa_K731400 Version 1 (Component)
IPTG inducible Cysteine desulfhydrase (CysDes)

araC-CysE
BBa_K731020 Version 1 (Component)
Inducible araC-pBAD promoter regulating WT CysE