HYGHygromicin_Resistance Version 1 (Unknown)Organism: Cryptococcus neoformans serotype A strain H99O
mCherrymCherry Version 1 (Unknown)Organism: Cryptococcus neoformans serotype A H99S strain
amdSamdS Version 1 (Unknown)Organism: Cryptococcus neoformans serotype A strain H99O
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
Reverse Orientation Sequence Pullreverse_orientation Version 1 (Activity)Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0030BBa_B0030 Version 1 (Component)RBS.1 (strong) -- modified from R. Weiss
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
GFP reportBBa_E0240 Version 1 (Component)GFP generator
Codon Optimised Sequence Pullcodon_optimisation Version 1 (Activity)Used to indicate that a sequence was codon optimised after pulling from the source and before submission
pBADBBa_K206000 Version 1 (Component)pBAD strong
BBa_I712074BBa_I712074 Version 1 (Component)T7 promoter (strong promoter from T7 bacteriophage)
BBa_M36010BBa_M36010 Version 1 (Component)Transcription Terminator (Strong)
BBa_K779501BBa_K779501 Version 1 (Component)Long reporter top strand MammoBlock
BBa_K779500BBa_K779500 Version 1 (Component)Long reporter top strand with bulge MammoBlock
BBa_K779503BBa_K779503 Version 1 (Component)Long input strand MammoBlock
BBa_K779504BBa_K779504 Version 1 (Component)Long scrambled input strand MammoBlock
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
BBa_K779502BBa_K779502 Version 1 (Component)Long reporter bottom strand MammoBlock
BBa_K608002BBa_K608002 Version 1 (Component)strong Promoter and strong RBS
T7 RBSBBa_K1362090 Version 1 (Component)strong T7 RBS
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
Truncated Sequence PullTruncated Version 1 (Activity)Used to indicate that a sequence was truncated after pulling from the source and before submission
BBa_K779200BBa_K779200 Version 1 (Component)Hef1A MammoBlock
BBa_J61002BBa_J61002 Version 1 (Component)EX-Ptet-S-rbsRFP-P "RFP reporter"
BBa_K779117BBa_K779117 Version 1 (Component)RNA Reporter top strand with quencher (RQ) MammoBlock
BBa_K864400BBa_K864400 Version 1 (Component)Ptac, trp & lac regulated promoter
BBa_K415506BBa_K415506 Version 1 (Component)pTRE-Tight L4R1 MammoBlock
BBa_J95001BBa_J95001 Version 1 (Component)Renilla Reniformis luciferase reporter
BBa_K511003BBa_K511003 Version 1 (Component)UAS-Gal4 Promoter MammoBlock
BBa_K415508BBa_K415508 Version 1 (Component)phEF1a L4R1 MammoBlock Entry Vector
His-StopBBa_K133133 Version 1 (Component)His affinity tag-stop
BBa_K779122BBa_K779122 Version 1 (Component)Short DNA reporter bottom strand (with ROX fluorophore) MammoBlock
BBa_K511102BBa_K511102 Version 1 (Component)mKate MammoBlock
BBa_K775004BBa_K775004 Version 1 (Component)GPCR reporter FUS1-EGFP
BBa_K575020BBa_K575020 Version 1 (Component)Genomic LasR/PAI1 Inducible Promoter (Long)
BBa_J33204BBa_J33204 Version 1 (Component)xylE reporter gene with rbs