ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
BBa_B0012BBa_B0012 Version 1 (Component)TE from coliphageT7
BBa_B0010BBa_B0010 Version 1 (Component)T1 from E. coli rrnB
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Reverse Orientation Sequence Pullreverse_orientation Version 1 (Activity)Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission
GFPBBa_E0040 Version 1 (Component)green fluorescent protein derived from jellyfish Aequeora victoria wild-type GFP (SwissProt: P42212
BBa_B0030BBa_B0030 Version 1 (Component)RBS.1 (strong) -- modified from R. Weiss
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
tetRBBa_C0040 Version 1 (Component)tetracycline repressor from transposon Tn10 (+LVA)
lacIBBa_C0012 Version 1 (Component)lacI repressor from E. coli (+LVA)
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
Codon Optimised Sequence Pullcodon_optimisation Version 1 (Activity)Used to indicate that a sequence was codon optimised after pulling from the source and before submission
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
cI lamBBa_C0051 Version 1 (Component)cI repressor from E. coli phage lambda (+LVA)
eyfpBBa_E0030 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
c2 P22BBa_C0053 Version 1 (Component)c2 repressor from Salmonella phage P22 (+LVA)
PhoPBO_26226 Version 1 (Component) BBa_K177039BBa_K177039 Version 1 (Component)PhoP from Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
BBa_K177040BBa_K177040 Version 1 (Component)PhoQ from Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
YFPBBa_E0032 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
HinBBa_J31000 Version 1 (Component)DNA-invertase Hin from Salmonella typhimurium
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
ecfpBBa_E0020 Version 1 (Component)engineered cyan fluorescent protein derived from A. victoria GFP
BBa_K861042BBa_K861042 Version 1 (Component)FadA, gene for fatty acid degradation from <i>Salmonella enterica</i> LT2
BBa_K177007BBa_K177007 Version 1 (Component)PhoP/PhoQ locus from salmonella typhimurium
BBa_I712074BBa_I712074 Version 1 (Component)T7 promoter (strong promoter from T7 bacteriophage)
Truncated Sequence PullTruncated Version 1 (Activity)Used to indicate that a sequence was truncated after pulling from the source and before submission
ECFPBBa_E0022 Version 1 (Component)enhanced cyan fluorescent protein derived from A. victoria GFP
BBa_K2066018BBa_K2066018 Version 1 (Component)UNS 2 Sequence, from Torella et al., 2013
BBa_K1459001BBa_K1459001 Version 1 (Component)PmrA from Salmonella enterica
aiiABBa_C0060 Version 1 (Component)autoinducer inactivation enzyme from Bacillus; hydrolyzes acetyl homoserine lactone
BBa_K861021BBa_K861021 Version 1 (Component)FadE gene for fatty acid degradation from <i>Salmonella enterica</i> LT2
cI 434BBa_C0052 Version 1 (Component)cI repressor from phage 434 (+LVA)
BBa_K1459016BBa_K1459016 Version 1 (Component)PmrB(WT) from Salmonella enterica
BBa_K861032BBa_K861032 Version 1 (Component)S-FadB gene for fatty acid degradation from <i>Salmonella enterica</i> LT2
BBa_K1459000BBa_K1459000 Version 1 (Component)Transcriptional factor PmrA sequence from Salmonella enterica.
BBa_K1459002BBa_K1459002 Version 1 (Component)C-term of PmrB from Salmonella enterica
BBa_K2066019BBa_K2066019 Version 1 (Component)UNS 3 Sequence, from Torella et al., 2013
lasrBBa_C0079 Version 1 (Component)lasR activator from P. aeruginosa PAO1(+LVA)
mnt (s)BBa_C0072 Version 1 (Component)mnt repressor (strong) from Salmonella phage P22 (+LVA)
BBa_K208001BBa_K208001 Version 1 (Component)Phasin (PhaP)
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
BBa_K311004BBa_K311004 Version 1 (Component)Complement of Ethanolamine Utilization Microcompartment proteins from Salmonella LT2
BBa_I15008BBa_I15008 Version 1 (Component)heme oxygenase (ho1) from Synechocystis
BBa_I15009BBa_I15009 Version 1 (Component)phycocyanobilin:ferredoxin oxidoreductase (PcyA) from synechocystis
tADH1BBa_J63002 Version 1 (Component)ADH1 terminator from S. cerevisiae
araCBBa_C0080 Version 1 (Component)araC arabinose operon regulatory protein (repressor/activator) from E. coli (+LVA)
mnt (w)BBa_C0073 Version 1 (Component)mnt repressor (weak) from Salmonella phage P22 (+LVA)
lasRBBa_C0179 Version 1 (Component)lasR activator from P. aeruginosa PAO1(no LVA)