iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
BBa_K1381016BBa_K1381016 Version 1 (Component)Silencing sRNA (20 bases long) for USP45 (Based on Spot42)
BBa_K1381014BBa_K1381014 Version 1 (Component)Silencing sRNA (10 bases long) for USP45 (Based on Spot42)
BBa_K1381015BBa_K1381015 Version 1 (Component)Silencing sRNA (15 bases long) for USP45 (Based on Spot42)
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
FurBO_11498 Version 1 (Component) hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_K737031BBa_K737031 Version 1 (Component)Spot42 based small RNA1
BBa_K737032BBa_K737032 Version 1 (Component)Spot42 based small RNA2
BBa_K1321005BBa_K1321005 Version 1 (Component)Synthetic Phytochelatin EC(20) RFC[25]
BBa_K879021BBa_K879021 Version 1 (Component)rbs based on B0034
BBa_K864440BBa_K864440 Version 1 (Component)Small RNA spot42
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
REACh2BBa_K1319002 Version 1 (Component)RFC[25]-compatible dark quencher based on K1319000 (E0030)
BBa_K1960200BBa_K1960200 Version 1 (Component)sRNA carrier based on M13 bacteriophage
BBa_K300010BBa_K300010 Version 1 (Component)PoPS-based self-inducible device
BBa_K564007BBa_K564007 Version 1 (Component)Regulatory device based on sRNA
Ptet-ChiXmBBa_K564020 Version 1 (Component)Mutated regulatory device based on sRNA.
BBa_K737058BBa_K737058 Version 1 (Component)Spot42 is a multitarget small RNA that mediates the discoordinate expression of the E.coli galactose
BBa_K115002BBa_K115002 Version 1 (Component)RNA thermometer (FourU)
rhIIBBa_C0070 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL
BBa_K1365169BBa_K1365169 Version 1 (Component)signal sequence from USP45 fused to aiiA
BBa_J23008BBa_J23008 Version 1 (Component)[key3c] riboregulator for lock3 variants
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
BBa_K766004BBa_K766004 Version 1 (Component)AndNot gate based on AHL
BBa_K115001BBa_K115001 Version 1 (Component)RNA thermometer (ROSE)
BBa_K360115BBa_K360115 Version 1 (Component)Mutated red luciferase based on BBa_I712019
BBa_I2032BBa_I2032 Version 1 (Component)T7 RNA polymerase
USP45BBa_K1381018 Version 1 (Component)B0034-USP45-(GS)x5
scarBBa_G0000 Version 1 (Component)SpeI/XbaI scar for RBS-CDS junctions
REACh1BBa_K1319001 Version 1 (Component)RFC[25]-compatible dark quencher based on K1319000 (E0030)
BBa_K1654007BBa_K1654007 Version 1 (Component)USP45 secretion tag for Lactococcus lactis
BBa_K801039BBa_K801039 Version 1 (Component)SV40NLS-GAL4AD-linker-PIF3 (part for GAL4/LexA based light-switchable promoter system)
loxBBa_J61046 Version 1 (Component)[Lox] site for recombination
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins