iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
lux pRBBa_R0062 Version 1 (Component)Promoter (luxR & HSL regulated -- lux pR)
LacIBBa_R0010 Version 1 (Component)promoter (lacI regulated)
p(tetR)BBa_R0040 Version 1 (Component)TetR repressible promoter
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxrBBa_C0062 Version 1 (Component)luxR repressor/activator, (no LVA?)
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
lux pLBBa_R0063 Version 1 (Component)Promoter (luxR & HSL regulated -- lux pL)<br>
pBad/araCBBa_I0500 Version 1 (Component)Inducible pBad/araC promoter
lacI+pLBBa_R0011 Version 1 (Component)Promoter (lacI regulated, lambda pL hybrid)
BBa_J23100BBa_J23100 Version 1 (Component)constitutive promoter family member
BBa_J23106BBa_J23106 Version 1 (Component)constitutive promoter family member
BBa_I13453BBa_I13453 Version 1 (Component)Pbad promoter
pT7BBa_I719005 Version 1 (Component)T7 Promoter
BBa_J04450BBa_J04450 Version 1 (Component)RFP Coding Device
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
cI+luxRBBa_R0065 Version 1 (Component)Promoter (lambda cI and luxR regulated -- hybrid)
BBa_J23119BBa_J23119 Version 1 (Component)constitutive promoter family member
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
BBa_F2620BBa_F2620 Version 1 (Component)3OC<sub>6</sub>HSL -> PoPS Receiver
rhIIBBa_C0070 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL
cI lamBBa_R0051 Version 1 (Component)promoter (lambda cI regulated)
RhlR+C4BBa_R0071 Version 1 (Component)Promoter (RhlR & C4-HSL regulated)
LuxRBBa_I0462 Version 1 (Component)luxR Protein Generator
BBa_J23101BBa_J23101 Version 1 (Component)constitutive promoter family member
P(Lac) IQBBa_I14032 Version 1 (Component)promoter P(Lac) IQ
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
BBa_I712074BBa_I712074 Version 1 (Component)T7 promoter (strong promoter from T7 bacteriophage)
GFP reportBBa_E0240 Version 1 (Component)GFP generator
YFPBBa_E0032 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
SEGA021SEGA021 Version 1 (Component)natural linear DNA.
OmpRBBa_R0082 Version 1 (Component)Promoter (OmpR, positive)
SEGA022SEGA022 Version 1 (Component)natural linear DNA.
BBa_I712004BBa_I712004 Version 1 (Component)CMV promoter
lux pRBBa_R1062 Version 1 (Component)Promoter, Standard (luxR and HSL regulated -- lux pR)<br>
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
BBa_J23114BBa_J23114 Version 1 (Component)constitutive promoter family member
BBa_J23102BBa_J23102 Version 1 (Component)constitutive promoter family member
BBa_K077124BBa_K077124 Version 1 (Component)Test construct for HSL/LuxR promotors, with LacZalpha output
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
GFP generaBBa_E0840 Version 1 (Component)GFP generator
BBa_J23104BBa_J23104 Version 1 (Component)constitutive promoter family member