SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_K2066018BBa_K2066018 Version 1 (Component)UNS 2 Sequence, from Torella et al., 2013
cheZBBa_K629003 Version 1 (Component)cheZ, chemotaxis regulator, protein phosphatase for CheY
BBa_K557001BBa_K557001 Version 1 (Component)Aptamer-CheZ: theophylline-sensitive synthetic riboswitch+phosphatase which dephosphorylates CheY-P
thRS2-ChZBBa_K537002 Version 1 (Component)Theophylline Riboswitch 2-CheZ
BBa_K784005BBa_K784005 Version 1 (Component)Theophylline riboswitch 12.1
BBa_K784006BBa_K784006 Version 1 (Component)Theophylline riboswitch 12.1 + mCherry
thRS1-ChZBBa_K537001 Version 1 (Component)Theophylline Riboswitch 1-CheZ
BBa_J52008BBa_J52008 Version 1 (Component)luciferase: luciferin 2-monooxygenase from Renilla reniformis (EC 1.13.12.5; SwissProt:: P27652)
BBa_I752000BBa_I752000 Version 1 (Component)Riboswitch(theophylline)
BBa_K738002BBa_K738002 Version 1 (Component)Theophyline riboswitch regulated RNA Scaffold (clover vision 2)
BBa_K784013BBa_K784013 Version 1 (Component)pLux+Theophylline riboswitch+mCherry
thRS2-VBBa_K537004 Version 1 (Component)Theophylline Riboswitch 2-Venus
BBa_J100138BBa_J100138 Version 1 (Component)Theophylline Riboswitch 2
BBa_K537012BBa_K537012 Version 1 (Component)Promoter-Theophylline riboswitch 2-CheZ-Venus-Double terminator
BBa_K249026BBa_K249026 Version 1 (Component)Theophylline Riboswitch (Improved)
BBa_K784047BBa_K784047 Version 1 (Component)Theophylline riboswitch + wt T7 RNAP
cheBBBa_C0024 Version 1 (Component)CheB chemotaxis coding sequence (protein glutamate methylesterase)
BBa_K598005BBa_K598005 Version 1 (Component)Theophylline Responsive Riboswitch P1G1 with Native RBS
BBa_K598006BBa_K598006 Version 1 (Component)Theophylline Responsive Riboswitch 1G1 with Engineered RBS
BBa_K1212001BBa_K1212001 Version 1 (Component)Theophylline Riboswitch (Clone E)
BBa_K1212000BBa_K1212000 Version 1 (Component)Theophylline Riboswitch (Clone 8.1*)
BBa_K598001BBa_K598001 Version 1 (Component)Theophylline Responsive Riboswitch 1G1 with Engineered RBS+GFP generator
Ribo-TetABBa_J119140 Version 1 (Component)Theophylline Riboswitch - tetracycline resistance protein
BBa_K537011BBa_K537011 Version 1 (Component)Promoter-Theophylline riboswitch 1-CheZ-Venus-Double terminator
BBa_K598007BBa_K598007 Version 1 (Component)Theophylline Responsive Riboswitch P1G1 with Native RBS+E0040+B0015
BBa_K598010BBa_K598010 Version 1 (Component)pBAD+Theophylline Responsive Riboswitch 1G1 with Engineered RBS+E0040+B0015
BBa_K598009BBa_K598009 Version 1 (Component)pBAD+Theophylline Responsive Riboswitch P1G1 with Native RBS+E0040+B0015
thRS1-VBBa_K537003 Version 1 (Component)Theophylline Riboswitch 1-Venus
BBa_K537010BBa_K537010 Version 1 (Component)Promoter-Theophylline riboswitch 2-Venus-Double terminator
cheYBBa_C0020 Version 1 (Component)CheY "tumbling" chemotaxis coding sequence
BBa_I752002BBa_I752002 Version 1 (Component)Riboswitch + CheZ
atRS-ChZBBa_K537000 Version 1 (Component)Atrazine Riboswitch-CheZ fusion
BBa_K784012BBa_K784012 Version 1 (Component)Spacer2 + RBS from theophylline riboswitch
BBa_K537018BBa_K537018 Version 1 (Component)Send and receive machine (with theophylline riboswitch type 2)
BBa_J100141BBa_J100141 Version 1 (Component)Theophylline Riboswitch 5
BBa_J89000BBa_J89000 Version 1 (Component)Theophylline riboswitch 12.1
BBa_J100137BBa_J100137 Version 1 (Component)Theophylline Riboswitch 1
BBa_J100142BBa_J100142 Version 1 (Component)Theophylline Riboswitch 6
BBa_J100140BBa_J100140 Version 1 (Component)Theophylline Riboswitch 4
BBa_J100139BBa_J100139 Version 1 (Component)Theophylline Riboswitch 3
BBa_K784007BBa_K784007 Version 1 (Component)Spacer + RBS from theophylline riboswitch
BBa_K411002BBa_K411002 Version 1 (Component)Theophylline-inducible Riboswitch+GFP+Terminator
BBa_J119318BBa_J119318 Version 1 (Component)eCDM8 expression + Theophylline riboswitch tetracycline resistance protein
CheABO_26354 Version 1 (Component) BBa_K784051BBa_K784051 Version 1 (Component)theophylline riboswitch + T7* RNAP