Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

LacI
BBa_R0010 Version 1 (Component)
promoter (lacI regulated)

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

lacI+pL
BBa_R0011 Version 1 (Component)
Promoter (lacI regulated, lambda pL hybrid)

cI lam
BBa_R0051 Version 1 (Component)
promoter (lambda cI regulated)

lux pR
BBa_R0062 Version 1 (Component)
Promoter (luxR & HSL regulated -- lux pR)

cI lam
BBa_C0051 Version 1 (Component)
cI repressor from E. coli phage lambda (+LVA)

cinr
BBa_C0077 Version 1 (Component)
cinR activator from Rhizobium leguminosarum (+LVA)

cI+luxR
BBa_R0065 Version 1 (Component)
Promoter (lambda cI and luxR regulated -- hybrid)

cinR
BBa_R0078 Version 1 (Component)
Promoter (cinR and HSL regulated)

BBa_M36010
BBa_M36010 Version 1 (Component)
Transcription Terminator (Strong)

cinR
BBa_R0077 Version 1 (Component)
Promoter (cinR and HSL regulated, RBS+)

LasR+PAI
BBa_R0079 Version 1 (Component)
Promoter (LasR & PAI regulated)

cII p22
BBa_R0053 Version 1 (Component)
Promoter (p22 cII regulated)

cinI
BBa_C0076 Version 1 (Component)
autoinducer synthetase

lux pL
BBa_R0063 Version 1 (Component)
Promoter (luxR & HSL regulated -- lux pL)<br>

cI 434
BBa_R0052 Version 1 (Component)
Promoter (434 cI regulated)

CinR
BBa_K1893028 Version 1 (Component)
Cin transcription regulator (CinR)

AraC
BBa_R0080 Version 1 (Component)
Promoter (AraC regulated)

RhlR+C4
BBa_R0071 Version 1 (Component)
Promoter (RhlR & C4-HSL regulated)

BBa_I741005
BBa_I741005 Version 1 (Component)
XylR Transcriptional Regulator Right Facing

cI lam
BBa_R1051 Version 1 (Component)
Promoter, Standard (lambda cI regulated)<br>

BBa_K864400
BBa_K864400 Version 1 (Component)
Ptac, trp & lac regulated promoter

BBa_I761014
BBa_I761014 Version 1 (Component)
cinr+cinl (RBS) with double terminator

cinR
BBa_C0177 Version 1 (Component)
cinR (-LVA)

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

araC
BBa_C0080 Version 1 (Component)
araC arabinose operon regulatory protein (repressor/activator) from E. coli (+LVA)

Ara
BBa_K808000 Version 1 (Component)
araC-Pbad - Arabinose inducible regulatory promoter/repressor unit

cI 434
BBa_C0052 Version 1 (Component)
cI repressor from phage 434 (+LVA)

BBa_I761000
BBa_I761000 Version 1 (Component)
cinr+cinl (RBS)

BBa_K1893006
BBa_K1893006 Version 1 (Component)
Cin receiver (CinR+pCin)

hixC
BBa_J44000 Version 1 (Component)
hixC binding site for Salmonella typhimurium Hin recombinase

BBa_K165010
BBa_K165010 Version 1 (Component)
ADH1 yeast transcription terminator

cI HK022
BBa_R0050 Version 1 (Component)
Promoter (HK022 cI regulated)

BBa_I761011
BBa_I761011 Version 1 (Component)
CinR, CinL and glucose controlled promotor

BBa_K1893007
BBa_K1893007 Version 1 (Component)
Cin receiver with GFP (CinR+pCin+GFP)

PenI
BBa_R0074 Version 1 (Component)
Promoter (PenI regulated)

cheZ
BBa_K629003 Version 1 (Component)
cheZ, chemotaxis regulator, protein phosphatase for CheY

BBa_I1468
BBa_I1468 Version 1 (Component)
CinR protein generator

BBa_K2116001
BBa_K2116001 Version 1 (Component)
Transcriptional regulator esaR

pCin
BBa_K1893029 Version 1 (Component)
CinR inducible promoter (pCin)

CII
BBa_K116602 Version 1 (Component)
CII coding region from &#955; phage

Las CIO
BBa_I14016 Version 1 (Component)
P(Las) CIO

cI HK022
BBa_C0050 Version 1 (Component)
cI repressor from phage HK022 (+LVA?)