Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
BBa_B0015BBa_B0015 Version 1 (Component)double terminator (B0010-B0012)
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
BBa_B0014BBa_B0014 Version 1 (Component)double terminator (B0012-B0011)
BBa_B0025BBa_B0025 Version 1 (Component)double terminator (B0015), reversed
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J119402BBa_J119402 Version 1 (Component)Double NiCo Riboswitch in tClone Red
BBa_J119398BBa_J119398 Version 1 (Component)NiCo Riboswitch in tClone Red
BBa_J119403BBa_J119403 Version 1 (Component)Triple NiCo Riboswitch in tClone Red
BBa_B0024BBa_B0024 Version 1 (Component)double terminator (B0012-B0011), reversed
BBa_B0017BBa_B0017 Version 1 (Component)double terminator (B0010-B0010)
BBa_K1321002BBa_K1321002 Version 1 (Component)Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25
BBa_K208014BBa_K208014 Version 1 (Component)GFP (Silver Fusion)/Double Terminator
BBa_J44001BBa_J44001 Version 1 (Component)Reverse RBS (RBS<sub>rev</sub>) -- corresponds to BBa_B0030
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
BBa_K1321003BBa_K1321003 Version 1 (Component)Re-entry of BBa_K863101, Cellulose Binding Domain CBDcex in rfc25
eforRedBBa_K592012 Version 1 (Component)eforRed, red chromoprotein
BBa_K1321340BBa_K1321340 Version 1 (Component)Double CBD (dCBD) with N-terminal linker
OriTRBBa_J01003 Version 1 (Component)OriT-R (Origin of transfer for the R-plasmid nic region)
BBa_K1813049BBa_K1813049 Version 1 (Component)<i>lacIR, nicC, nicX and nicD</i> Regulon
BBa_K1813047BBa_K1813047 Version 1 (Component)<i>lacIR, cch2, nicC, nicX and nicD</i> Regulon
BBa_K1813048BBa_K1813048 Version 1 (Component)<i>nicD, nicF and nicE</i> Regulon
BBa_J119395BBa_J119395 Version 1 (Component)tClone Red containing the RS3 Riboswitch
BBa_J100261BBa_J100261 Version 1 (Component)rClone Red with Riboswitch C
BBa_J100262BBa_J100262 Version 1 (Component)rClone Red with Riboswitch E
RGD-His-StBBa_K133036 Version 1 (Component)RGD-His affinity tag-Stop
BBa_K1813044BBa_K1813044 Version 1 (Component)<i>nicF and nicE</i> Expression Cassette
BBa_K823017BBa_K823017 Version 1 (Component)double terminator (B0012-B0011)
BBa_K1212001BBa_K1212001 Version 1 (Component)Theophylline Riboswitch (Clone E)
BBa_K1212000BBa_K1212000 Version 1 (Component)Theophylline Riboswitch (Clone 8.1*)
BBa_J100209BBa_J100209 Version 1 (Component)tClone Red RS8
BBa_J100208BBa_J100208 Version 1 (Component)tClone Red RS3shift
BBa_J119362BBa_J119362 Version 1 (Component)pClone Red pTac
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
BBa_K1813042BBa_K1813042 Version 1 (Component)<i>lacIR, nicC and nicX</i> Regulon
BBa_K1520500BBa_K1520500 Version 1 (Component)red fluorescent protein
RexBO_10687 Version 1 (Component) BBa_J100204BBa_J100204 Version 1 (Component)actClone Red
BBa_I732092BBa_I732092 Version 1 (Component)Double Repoters (LacZ-alpha and RFP)
BBa_K1813045BBa_K1813045 Version 1 (Component)<i>LacI Reversed, cch2, nicC and nicX</i> Regulon
BBa_J119361BBa_J119361 Version 1 (Component)tClone Red: Device for Testing Transciptional Terminators and Riboswitches via Golden Gate Assembly
Clone inBBa_K323110 Version 1 (Component)pBAD_BsaI_DTER
BBa_K322124BBa_K322124 Version 1 (Component)Red light sensor Cph8 (from Coliroid) with RBS
BBa_J22106BBa_J22106 Version 1 (Component)rec A (SOS) Promoter
BBa_K902023BBa_K902023 Version 1 (Component)Moco Riboswitch
BBa_K1813043BBa_K1813043 Version 1 (Component)<i>nicX and nicD</i> Expression Cassette
BBa_K1051000BBa_K1051000 Version 1 (Component)Stop codon free RFP in RFC[23] standard