SynBioHub

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SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

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BBa_J23115
BBa_J23115 Version 1 (Component)
constitutive promoter family member

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BBa_J23117
BBa_J23117 Version 1 (Component)
constitutive promoter family member

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RhI
BBa_I14017 Version 1 (Component)
P(Rhl)

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lux pL
BBa_R0063 Version 1 (Component)
Promoter (luxR & HSL regulated -- lux pL)

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cinR
BBa_R0078 Version 1 (Component)
Promoter (cinR and HSL regulated)

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BBa_J44001
BBa_J44001 Version 1 (Component)
Reverse RBS (RBSrev) -- corresponds to BBa_B0030

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hixC
BBa_J44000 Version 1 (Component)
hixC binding site for Salmonella typhimurium Hin recombinase

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eforRed
BBa_K592012 Version 1 (Component)
eforRed, red chromoprotein

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BBa_J23109
BBa_J23109 Version 1 (Component)
constitutive promoter family member

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BBa_J23118
BBa_J23118 Version 1 (Component)
constitutive promoter family member

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BBa_J22106
BBa_J22106 Version 1 (Component)
rec A (SOS) Promoter

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cII p22
BBa_R0053 Version 1 (Component)
Promoter (p22 cII regulated)

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RhlR+C4
BBa_R0071 Version 1 (Component)
Promoter (RhlR & C4-HSL regulated)

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aeBlue
BBa_K864401 Version 1 (Component)
aeBlue blue chromoprotein

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pLux/Tet
BBa_K176000 Version 1 (Component)
pLux/Tet Hybrid Promoter: (LuxR+,TetR-)->PoPS

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BBa_K091100
BBa_K091100 Version 1 (Component)
pLac_lux hybrid promoter

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virG
BBa_K389002 Version 1 (Component)
Mutated virG

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BBa_K864400
BBa_K864400 Version 1 (Component)
Ptac, trp & lac regulated promoter

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BBa_K325210
BBa_K325210 Version 1 (Component)
Red Firefly Luciferase and LRE L. Cruciata (E. coli optimised)

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BBa_J44002
BBa_J44002 Version 1 (Component)
pBAD reverse

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BBa_K1321002
BBa_K1321002 Version 1 (Component)
Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25

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RGD-His-St
BBa_K133036 Version 1 (Component)
RGD-His affinity tag-Stop

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BBa_R0085
BBa_R0085 Version 1 (Component)
T7 Consensus Promoter Sequence

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BBa_K1679038
BBa_K1679038 Version 1 (Component)
RiboJ

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BBa_K390018
BBa_K390018 Version 1 (Component)
sigA promoter, 5'UTR, and RBS

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BBa_K568001
BBa_K568001 Version 1 (Component)
Optogenetical AND-Gate red/blue light

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BBa_K1321003
BBa_K1321003 Version 1 (Component)
Re-entry of BBa_K863101, Cellulose Binding Domain CBDcex in rfc25

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BBa_K346002
BBa_K346002 Version 1 (Component)
PmerT promoter (mercury-responsive)

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YF1
BBa_K592004 Version 1 (Component)
YF1 blue-light sensor protein

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BBa_K322139
BBa_K322139 Version 1 (Component)
Blue emitting luciferase (from X. luminescens)

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BBa_J33207
BBa_J33207 Version 1 (Component)
lac promoter and lacZ

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BBa_K206001
BBa_K206001 Version 1 (Component)
pBAD weak

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pCon 0.36
BBa_K176009 Version 1 (Component)
constitutive promoter family member J23107 actual sequence (pCon 0.36)

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AraC O2
BBa_R0081 Version 1 (Component)
Inhibitor (AraC loop attachment with O2 site)

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PT5lac
BBa_K592008 Version 1 (Component)
T5-lac Promoter

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Zif23
BBa_R2000 Version 1 (Component)
Promoter, Zif23 regulated, test: between

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luc
BBa_K389004 Version 1 (Component)
Luciferase from pGL4.10[luc2]

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BBa_I746104
BBa_I746104 Version 1 (Component)
P2 promoter in agr operon from S. aureus

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Bla
BBa_I14018 Version 1 (Component)
P(Bla)

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BBa_K199106
BBa_K199106 Version 1 (Component)
pLpp promoter

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RE
BBa_J3101 Version 1 (Component)
Recombinational Enhancer (RE) for Hin/Hix inverting

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luxR
BBa_R0061 Version 1 (Component)
Promoter (HSL-mediated luxR repressor)

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SBFP2
BBa_K156010 Version 1 (Component)
SBFP2 (strongly enhanced blue fluorescent protein)

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BBa_J61051
BBa_J61051 Version 1 (Component)
[Psal1]

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BBa_K592016
BBa_K592016 Version 1 (Component)
B0034-YF1-B0034-FixJ, blue light sensor and RR with RBS

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BBa_I746360
BBa_I746360 Version 1 (Component)
PF promoter from P2 phage

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Pcar
BBa_K861171 Version 1 (Component)
Pcar, synthetic promoter repressed by CRP

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BBa_K117002
BBa_K117002 Version 1 (Component)
LsrA promoter (indirectly activated by AI-2)

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Ara
BBa_K808000 Version 1 (Component)
araC-Pbad - Arabinose inducible regulatory promoter/repressor unit

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