SynBioHub

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SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

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LacI
BBa_R0010 Version 1 (Component)
promoter (lacI regulated)

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lacI+pL
BBa_R0011 Version 1 (Component)
Promoter (lacI regulated, lambda pL hybrid)

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lux pR
BBa_R0062 Version 1 (Component)
Promoter (luxR & HSL regulated -- lux pR)

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cI lam
BBa_R0051 Version 1 (Component)
promoter (lambda cI regulated)

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LasR+PAI
BBa_R0079 Version 1 (Component)
Promoter (LasR & PAI regulated)

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cI+luxR
BBa_R0065 Version 1 (Component)
Promoter (lambda cI and luxR regulated -- hybrid)

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lux pL
BBa_R0063 Version 1 (Component)
Promoter (luxR & HSL regulated -- lux pL)<br>

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AraC
BBa_R0080 Version 1 (Component)
Promoter (AraC regulated)

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cII p22
BBa_R0053 Version 1 (Component)
Promoter (p22 cII regulated)

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RhlR+C4
BBa_R0071 Version 1 (Component)
Promoter (RhlR & C4-HSL regulated)

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BBa_K864400
BBa_K864400 Version 1 (Component)
Ptac, trp & lac regulated promoter

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cI 434
BBa_R0052 Version 1 (Component)
Promoter (434 cI regulated)

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cI lam
BBa_R1051 Version 1 (Component)
Promoter, Standard (lambda cI regulated)<br>

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//regulator
regulator Version 1 (Collection)

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PenI
BBa_R0074 Version 1 (Component)
Promoter (PenI regulated)

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cinR
BBa_R0078 Version 1 (Component)
Promoter (cinR and HSL regulated)

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BBa_E0430
BBa_E0430 Version 1 (Component)
EYFP (RBS+ LVA- TERM) (B0034.E0030.B0015)

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BBa_K1344007
BBa_K1344007 Version 1 (Component)
Thermo-regulated 1018

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cinR
BBa_R0077 Version 1 (Component)
Promoter (cinR and HSL regulated, RBS+)

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BBa_I763026
BBa_I763026 Version 1 (Component)
LacI coding device regulated by pTetR

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cI HK022
BBa_R0050 Version 1 (Component)
Promoter (HK022 cI regulated)

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1018
BBa_K1344000 Version 1 (Component)
1018 synthetic cationic peptide

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Mnt
BBa_R0073 Version 1 (Component)
Promoter (Mnt regulated)

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lux pR
BBa_R1062 Version 1 (Component)
Promoter, Standard (luxR and HSL regulated -- lux pR)<br>

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Zif23
BBa_R2000 Version 1 (Component)
Promoter, Zif23 regulated, test: between

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BBa_E0422
BBa_E0422 Version 1 (Component)
ECFP (RBS+ LVA+ TERM) (B0034.E0022.B0015)

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cheZ
BBa_K629003 Version 1 (Component)
cheZ, chemotaxis regulator, protein phosphatase for CheY

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BBa_E0420
BBa_E0420 Version 1 (Component)
ECFP (RBS+ LVA- TERM) (B0034.E0020.B0015)

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//rbs/prokaryote/regulated
rbs_prokaryote_regulated Version 1 (Collection)

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BBa_I741005
BBa_I741005 Version 1 (Component)
XylR Transcriptional Regulator Right Facing

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//rbs/prokaryote/regulated/issacs
rbs_prokaryote_regulated_issacs Version 1 (Collection)

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BBa_K180000
BBa_K180000 Version 1 (Component)
Hybrid promoter (trp & lac regulated -- tac pR)

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BBa_K1151008
BBa_K1151008 Version 1 (Component)
RFP nickel regulated

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BBa_K592003
BBa_K592003 Version 1 (Component)
PcpcG2 promoter, ccaR-regulated

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BBa_K542003
BBa_K542003 Version 1 (Component)
pBAD Regulated TetR

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pLambda+RF
BBa_I763007 Version 1 (Component)
promoter lambda (cI regulated) with RFP reporter

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BBa_K1695000
BBa_K1695000 Version 1 (Component)
Tightly-regulated lactose-inducible promoter

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cI TP901
BBa_R0075 Version 1 (Component)
Promoter (TP901 cI regulated)

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NLS+Term
BBa_K165018 Version 1 (Component)
SV40 nuclear localization sequence + ADH1 transcription terminator

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BBa_I732820
BBa_I732820 Version 1 (Component)
LacI (RBS+, TERM+)

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BBa_E0432
BBa_E0432 Version 1 (Component)
EYFP (RBS+ LVA+ TERM) (B0034.E0032.B0015)

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BBa_K190016
BBa_K190016 Version 1 (Component)
Zinc Promoter (ZntR regulated)

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pArsR
BBa_K190015 Version 1 (Component)
Arsenic Promoter (ArsR regulated)

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BBa_K649001
BBa_K649001 Version 1 (Component)
GFP regulated by 3OC12-HSL and LasR

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RcsB
BBa_K200000 Version 1 (Component)
Colanic acid global regulator -> RcsB

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BBa_K182005
BBa_K182005 Version 1 (Component)
TetR regulated by CI operator (RBS+, Term-) with LVA tag

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BBa_K574004
BBa_K574004 Version 1 (Component)
3OC12HSL regulated by TetR

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BBa_K1667000
BBa_K1667000 Version 1 (Component)
thermo-regulated opdA coupled with RecA-reduced ccdB

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BBa_K823042
BBa_K823042 Version 1 (Component)
PsspK promoter regulated by sigma G

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