APP1GenBank_CP047908_Region_1244167_1244926 Version 1 (Unknown)Organism: Cryptococcus neoformans var. grubii H99 (Cryptococcus neoformans serotype A)
CnU6CnU6_terminator Version 1 (Unknown)Organism: Cryptococcus neoformans var. neoformans JEC21
URA5GenBank_CM000046_Region_302227_303005 Version 1 (Unknown)Organism: Cryptococcus neoformans var. neoformans B-3501A
CnU6GenBank_AE017348_Region_871991_872263 Version 1 (Unknown)Organism: Cryptococcus neoformans var. neoformans JEC21
ACT1GenBank_CP003820_Region_1242235_1243067 Version 1 (Unknown)Organism: Cryptococcus neoformans var. grubii H99 (Cryptococcus neoformans serotype A)
GAL7GenBank_CP003831_Region_178967_179986 Version 1 (Unknown)Organism: Cryptococcus neoformans var. grubii H99
HYGHygromicin_Resistance Version 1 (Unknown)Organism: Cryptococcus neoformans serotype A strain H99O
URA5GenBank_CM000046_Region_301512_302226 Version 1 (Unknown)Organism: Cryptococcus neoformans var. neoformans B-3501A
TEF1GenBank_CP003831_Region_375181_376053 Version 1 (Unknown)Organism: Cryptococcus neoformans var. grubi H99
UGE2GenBank_CP003831_Region_176453_177430 Version 1 (Unknown)Organism: Cryptococcus neoformans var. grubii H99
HOG1GenBank_CP003830_Region_176667_176966 Version 1 (Unknown)Organism: Cryptococcus neoformans var. grubi H99
TEF1GenBank_CP003831_Region_377755_378976 Version 1 (Unknown)Organism: Cryptococcus neoformans var. grubi H99
mCherrymCherry Version 1 (Unknown)Organism: Cryptococcus neoformans serotype A H99S strain
GPDGenBank_AE017346_Region_940695_942557 Version 1 (Unknown)Organism: Cryptococcus neoformans var. neoformans JEC21
TRP1GenBank_CP003828_Region_1023919_1024166 Version 1 (Unknown)Organism: Cryptococcus neoformans var. grubi H99
GAL7GenBank_AE017353_Region_190704_1911746 Version 1 (Unknown)Organism: Cryptococcus neoformans var. neoformans JEC21
URA5GenBank_CM000046_Region_303006_303540 Version 1 (Unknown)Organism: Cryptococcus neoformans var. neoformans B-3501A
Cas9Cas9 Version 1 (Unknown)Organism: Cryptococcus neoformans var. grubi H99
GAL1GenBank_CP003831_Region_176110_177085 Version 1 (Unknown)Organism: Cryptococcus neoformans var. grubii H99
GFPGFP Version 1 (Unknown)Organism: Cryptococcus neoformans serotype A H99S
amdSamdS Version 1 (Unknown)Organism: Cryptococcus neoformans serotype A strain H99O
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0034BBa_B0034 Version 1 (Component)RBS (Elowitz 1999) -- defines RBS efficiency
BBa_B0012BBa_B0012 Version 1 (Component)TE from coliphageT7
BBa_B0010BBa_B0010 Version 1 (Component)T1 from E. coli rrnB
BBa_B0015BBa_B0015 Version 1 (Component)double terminator (B0010-B0012)
p(tetR)BBa_R0040 Version 1 (Component)TetR repressible promoter
GFPBBa_E0040 Version 1 (Component)green fluorescent protein derived from jellyfish Aequeora victoria wild-type GFP (SwissProt: P42212
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0030BBa_B0030 Version 1 (Component)RBS.1 (strong) -- modified from R. Weiss
LacIBBa_R0010 Version 1 (Component)promoter (lacI regulated)
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
tetRBBa_C0040 Version 1 (Component)tetracycline repressor from transposon Tn10 (+LVA)
lacIBBa_C0012 Version 1 (Component)lacI repressor from E. coli (+LVA)
lacI+pLBBa_R0011 Version 1 (Component)Promoter (lacI regulated, lambda pL hybrid)
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
BBa_J23100BBa_J23100 Version 1 (Component)constitutive promoter family member
scarBBa_J176041 Version 1 (Component)Silver scar
lux pRBBa_R0062 Version 1 (Component)Promoter (luxR & HSL regulated -- lux pR)
cI lamBBa_C0051 Version 1 (Component)cI repressor from E. coli phage lambda (+LVA)
BBa_J23119BBa_J23119 Version 1 (Component)constitutive promoter family member
BBa_J04450BBa_J04450 Version 1 (Component)RFP Coding Device
pBad/araCBBa_I0500 Version 1 (Component)Inducible pBad/araC promoter
eyfpBBa_E0030 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
cI lamBBa_R0051 Version 1 (Component)promoter (lambda cI regulated)
luxrBBa_C0062 Version 1 (Component)luxR repressor/activator, (no LVA?)
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030