Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

mRFP1
BBa_E1010 Version 1 (Component)
**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)

cI lam
BBa_R0051 Version 1 (Component)
promoter (lambda cI regulated)

cI lam
BBa_C0051 Version 1 (Component)
cI repressor from E. coli phage lambda (+LVA)

lacI+pL
BBa_R0011 Version 1 (Component)
Promoter (lacI regulated, lambda pL hybrid)

cI 434
BBa_C0052 Version 1 (Component)
cI repressor from phage 434 (+LVA)

cI+luxR
BBa_R0065 Version 1 (Component)
Promoter (lambda cI and luxR regulated -- hybrid)

BBa_J04450
BBa_J04450 Version 1 (Component)
RFP Coding Device

GFP report
BBa_E0240 Version 1 (Component)
GFP generator

cI 434
BBa_R0052 Version 1 (Component)
Promoter (434 cI regulated)

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Prm +
BBa_I12006 Version 1 (Component)
Modified lamdba Prm promoter (repressed by 434 cI)

cI lam
BBa_R1051 Version 1 (Component)
Promoter, Standard (lambda cI regulated)<br>

BBa_P0451
BBa_P0451 Version 1 (Component)
PoPS -> cI (lambda) [S0153]

mCherry
BBa_J06504 Version 1 (Component)
monomeric RFP optimized for bacteria

pLambda+RF
BBa_I763007 Version 1 (Component)
promoter lambda (cI regulated) with RFP reporter

BBa_C0056
BBa_C0056 Version 1 (Component)
cI repressor from phage 434 (no LVA)

BBa_K1913016
BBa_K1913016 Version 1 (Component)
434- and lambda cI balance RFP reporter

BBa_K1913006
BBa_K1913006 Version 1 (Component)
434- and lambda cI balance operon + mRFP reporter

cI HK022
BBa_C0050 Version 1 (Component)
cI repressor from phage HK022 (+LVA?)

araC
BBa_C0080 Version 1 (Component)
araC arabinose operon regulatory protein (repressor/activator) from E. coli (+LVA)

cI
BBa_I9200 Version 1 (Component)
cI lambda

BBa_P0152
BBa_P0152 Version 1 (Component)
PoPS -> cI (434) [S0166]

BBa_K1913007
BBa_K1913007 Version 1 (Component)
434- and lambda cI operon for tuning protein balance

BBa_P0151
BBa_P0151 Version 1 (Component)
PoPS -> cI (lambda) [S0165]

Prm +
BBa_I12007 Version 1 (Component)
Modified lambda Prm promoter (OR-3 obliterated)

mRFPr
BBa_J31008 Version 1 (Component)
RFP reverse

mRFP1
BBa_I13502 Version 1 (Component)
Screening plasmid intermediate

BBa_I12036
BBa_I12036 Version 1 (Component)
Modified lamdba Prm promoter (cooperative repression by 434 cI)

BBa_J61002
BBa_J61002 Version 1 (Component)
EX-Ptet-S-rbsRFP-P "RFP reporter"

cI 434
BBa_R1052 Version 1 (Component)
Promoter, Standard (434 cI regulated)<br>

BBa_I13458
BBa_I13458 Version 1 (Component)
promoter C and arabinose C operon

BBa_I13401
BBa_I13401 Version 1 (Component)
GFP reporter for RHS of library test constructs

cI HK022
BBa_R0050 Version 1 (Component)
Promoter (HK022 cI regulated)

mRFP
BBa_K1615089 Version 1 (Component)
mRFP RFC25

mRFP1
BBa_E2050 Version 1 (Component)
derivative of mRFP1, yeast-optimized

BBa_K081014
BBa_K081014 Version 1 (Component)
RFP protein generator - PoPS->RFP

BBa_K1357010
BBa_K1357010 Version 1 (Component)
eRFP reporter

BBa_I13521
BBa_I13521 Version 1 (Component)
Ptet mRFP

mRFP sel.
BBa_K1362422 Version 1 (Component)
mRFP selection marker with outward BsaI restriction sites

BBa_K1343021
BBa_K1343021 Version 1 (Component)
Plux->amilCP->lambda CI

BBa_I732092
BBa_I732092 Version 1 (Component)
Double Repoters (LacZ-alpha and RFP)

cI TP901
BBa_C0075 Version 1 (Component)
TP901 cI repressor from phage TP901-1 (+LVA)

BBa_K176107
BBa_K176107 Version 1 (Component)
CI Inverter + GFP Reporter: PoPS->cI-LVA+pCI->GFP

cI857
BBa_J06503 Version 1 (Component)
Lambda cI857 (Lambda II) (RBS- LVA+)

BBa_I12024
BBa_I12024 Version 1 (Component)
Lambda cI Generator (PLlac 0-1 promoter )