URA5GenBank_CM000046_Region_302227_303005 Version 1 (Unknown)Organism: Cryptococcus neoformans var. neoformans B-3501A
URA5GenBank_CM000046_Region_301512_302226 Version 1 (Unknown)Organism: Cryptococcus neoformans var. neoformans B-3501A
URA5GenBank_CM000046_Region_303006_303540 Version 1 (Unknown)Organism: Cryptococcus neoformans var. neoformans B-3501A
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0030BBa_B0030 Version 1 (Component)RBS.1 (strong) -- modified from R. Weiss
GFPBBa_E0040 Version 1 (Component)green fluorescent protein derived from jellyfish Aequeora victoria wild-type GFP (SwissProt: P42212
cI lamBBa_C0051 Version 1 (Component)cI repressor from E. coli phage lambda (+LVA)
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
cI lamBBa_R0051 Version 1 (Component)promoter (lambda cI regulated)
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
cI 434BBa_C0052 Version 1 (Component)cI repressor from phage 434 (+LVA)
eyfpBBa_E0030 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
cI 434BBa_R0052 Version 1 (Component)Promoter (434 cI regulated)
cI+luxRBBa_R0065 Version 1 (Component)Promoter (lambda cI and luxR regulated -- hybrid)
Prm +BBa_I12006 Version 1 (Component)Modified lamdba Prm promoter (repressed by 434 cI)
YFPBBa_E0032 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
ecfpBBa_E0020 Version 1 (Component)engineered cyan fluorescent protein derived from A. victoria GFP
BBa_I12054BBa_I12054 Version 1 (Component)B protein (434 cI) subassembly for modified BL oscillator
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
ECFPBBa_E0022 Version 1 (Component)enhanced cyan fluorescent protein derived from A. victoria GFP
Prm +BBa_I12007 Version 1 (Component)Modified lambda Prm promoter (OR-3 obliterated)
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
cI lamBBa_R1051 Version 1 (Component)Promoter, Standard (lambda cI regulated)<br>
cI HK022BBa_C0050 Version 1 (Component)cI repressor from phage HK022 (+LVA?)
BBa_C0056BBa_C0056 Version 1 (Component)cI repressor from phage 434 (no LVA)
RBS-spoVGBBa_K143021 Version 1 (Component)SpoVG ribosome binding site (RBS) for B. subtilis
LuxRBBa_I0462 Version 1 (Component)luxR Protein Generator
tetA(C)bBBa_J31006 Version 1 (Component)tetracycline resistance protein TetA(C) (backwards) [cf. BBa_J31007]
BBa_P0152BBa_P0152 Version 1 (Component)PoPS -> cI (434) [S0166]
BBa_I12056BBa_I12056 Version 1 (Component)A protein (lambda cI) subassembly for modified BL oscillator based on I12036
BBa_I12055BBa_I12055 Version 1 (Component)A protein (lambda cI) subassembly for modified BL oscillator based on I12006
BBa_I12057BBa_I12057 Version 1 (Component)A protein (lambda cI) subassembly for modified BL oscillator based on I12040
BBa_I12036BBa_I12036 Version 1 (Component)Modified lamdba Prm promoter (cooperative repression by 434 cI)
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
Pveg-spoVGBBa_K143053 Version 1 (Component)Promoter Pveg and RBS spoVG for B. subtilis
BBa_K209402BBa_K209402 Version 1 (Component)AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]
tetA(C)fBBa_J31007 Version 1 (Component)tetracycline resistance protein TetA(C) (forward), [cf. BBa_J31006]
cI 434BBa_R1052 Version 1 (Component)Promoter, Standard (434 cI regulated)<br>
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
BBa_P0451BBa_P0451 Version 1 (Component)PoPS -> cI (lambda) [S0153]
PvegBBa_K143012 Version 1 (Component)Promoter veg a constitutive promoter for B. subtilis
araCBBa_C0080 Version 1 (Component)araC arabinose operon regulatory protein (repressor/activator) from E. coli (+LVA)
cheZBBa_K629003 Version 1 (Component)cheZ, chemotaxis regulator, protein phosphatase for CheY
cIBBa_I9200 Version 1 (Component)cI lambda
cI HK022BBa_R0050 Version 1 (Component)Promoter (HK022 cI regulated)
EYFPBBa_E0034 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
BBa_I12043BBa_I12043 Version 1 (Component)Activator for BL oscillator with reporter protein