SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K808025BBa_K808025 Version 1 (Component)FsC: Cutinase PET cleaving enzyme
BBa_C0261BBa_C0261 Version 1 (Component)AHL-making Enzyme, luxI (+RBS)
aiiABBa_C0060 Version 1 (Component)autoinducer inactivation enzyme from Bacillus; hydrolyzes acetyl homoserine lactone
EcoRIEcoRI Version 1 (Component) NheINheI Version 1 (Component) PacIPacI Version 1 (Component) SpeISpeI Version 1 (Component) BBa_K2066018BBa_K2066018 Version 1 (Component)UNS 2 Sequence, from Torella et al., 2013
BBa_K2066019BBa_K2066019 Version 1 (Component)UNS 3 Sequence, from Torella et al., 2013
BBa_K1055007BBa_K1055007 Version 1 (Component)FsC: functional cutinase
aiiABBa_C0160 Version 1 (Component)autoinducer inactivation enzyme aiiA (no LVA)
PESTBBa_J176018 Version 1 (Component)PEST
BBa_K1149036BBa_K1149036 Version 1 (Component)Cutinase-like Enzyme
BBa_K808026BBa_K808026 Version 1 (Component)pNB-Est 13: Esterase PET cleaving enzyme
pLux/TetBBa_K176000 Version 1 (Component)pLux/Tet Hybrid Promoter: (LuxR+,TetR-)->PoPS
BBa_K936000BBa_K936000 Version 1 (Component)LC Cutinase
BBa_I13521BBa_I13521 Version 1 (Component)Ptet mRFP
BBa_K1149009BBa_K1149009 Version 1 (Component)Cutinase-Like Enzyme
BBa_K1582038BBa_K1582038 Version 1 (Component)FsC without stop codon
BBa_K923006BBa_K923006 Version 1 (Component)This is the cutinase coding enzyme
BBa_K936013BBa_K936013 Version 1 (Component)pelB-LC-Cutinase fusion protein
BBa_J61002BBa_J61002 Version 1 (Component)EX-Ptet-S-rbsRFP-P "RFP reporter"
pET fusionBBa_K1122673 Version 1 (Component)Ethanol production module
BBa_K936020BBa_K936020 Version 1 (Component)K206000+B0034+pelB+Cutinase+Polyhistidine Tag
BBa_C0260BBa_C0260 Version 1 (Component)autoinducer inactivation enzyme, AaiiA (+RBS)
BBa_I742114BBa_I742114 Version 1 (Component)Feruloyl-CoA synthase (fcs)
ATF1 generBBa_J45199 Version 1 (Component)Banana odor enzyme (ATF1) generator
BBa_K936014BBa_K936014 Version 1 (Component)pelB-LC-Cutinase with polyhistidine-tag
BBa_K1614025BBa_K1614025 Version 1 (Component)Ketamin-dependent self cleaving F8 - readout DNAzyme
BBa_K2010999BBa_K2010999 Version 1 (Component)PETase (PET-degrading enzyme, origin I. sakaiensis)
BBa_K2010000BBa_K2010000 Version 1 (Component)PETase (PET-degrading enzyme, origin I. sakaiensis)
BSMT1BBa_J45119 Version 1 (Component)Wintergreen odor enzyme (BMST1) generator
HisTag-HICBBa_K1602018 Version 1 (Component)Humicola insolens cutinase with N-terminal His-Tag
BBa_K2066506BBa_K2066506 Version 1 (Component)RiboJ (Ribozyme Insulator) Lou et. al. 2012
BBa_K2010002BBa_K2010002 Version 1 (Component)pelB + PETase (PET-degrading enzyme, origin I. sakaiensis)
BBa_K2010001BBa_K2010001 Version 1 (Component)ompT + PETase (PET-degrading enzyme, origin I. sakaiensis)
BBa_K2010003BBa_K2010003 Version 1 (Component)YebF + PETase (PET-degrading enzyme, origin I. sakaiensis)
BBa_K2010004BBa_K2010004 Version 1 (Component)sfGFP + PETase (PET-degrading enzyme, origin I. sakaiensis)
Rubber FucBBa_K1088024 Version 1 (Component)HRT2 prenyltransferase from Hevea Brasilianis (ara promoter without araC: arabinose inducible)