iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0010BBa_B0010 Version 1 (Component)T1 from E. coli rrnB
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
lacIBBa_C0012 Version 1 (Component)lacI repressor from E. coli (+LVA)
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
cI lamBBa_C0051 Version 1 (Component)cI repressor from E. coli phage lambda (+LVA)
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
BBa_J61101BBa_J61101 Version 1 (Component)Ribosome Binding Site Family Member
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
BBa_J61120BBa_J61120 Version 1 (Component)Ribosome Binding Site Family Member
tetA(C)fBBa_J31007 Version 1 (Component)tetracycline resistance protein TetA(C) (forward), [cf. BBa_J31006]
BBa_K2132100BBa_K2132100 Version 1 (Component)HydA,E,F,G together with loxP sites
loxBBa_J61046 Version 1 (Component)[Lox] site for recombination
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
BBa_I13457BBa_I13457 Version 1 (Component)Improved insertion site with two RNAse E cut sites
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_J61100BBa_J61100 Version 1 (Component)Ribosome Binding Site Family Member
BBa_J85600BBa_J85600 Version 1 (Component)attB1 recombination site
AraC O2BBa_R0081 Version 1 (Component)Inhibitor (AraC loop attachment with O2 site)
RBS_cassetteRBS_cassette Version 1 (Component)AvrII restriction site (cctagg), overlapped with RBS (aggagga)
araCBBa_C0080 Version 1 (Component)araC arabinose operon regulatory protein (repressor/activator) from E. coli (+LVA)
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
"G"BBa_K1080009 Version 1 (Component)ChlG
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
BBa_J33201BBa_J33201 Version 1 (Component)E. coli chromosomal ars promoter with arsR repressor gene
BBa_K1114107BBa_K1114107 Version 1 (Component)Bicistronic Design RBS 2, MoClo Format with BC fusion sites
BBa_K228000BBa_K228000 Version 1 (Component)T7ptag(T7polymerase with amber mutation)
preSCsiteBBa_J18919 Version 1 (Component)preScission protease cleavage site (E. coli-optimized)
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
mRFP sel.BBa_K1362422 Version 1 (Component)mRFP selection marker with outward BsaI restriction sites
BBa_K2066527BBa_K2066527 Version 1 (Component)B0034 with scar TACTAG
RFC105 ABBa_K1362414 Version 1 (Component)N-terminal start overhang (T)(A)-(G)ATG=RBS+Start RFC[105] A
BBa_K1641014BBa_K1641014 Version 1 (Component)Up-side-down RBS::mcherry-ssra with loxP recognition sites.
BBa_K299107BBa_K299107 Version 1 (Component)T.xbaI.G (T followed by xbaI site and additional G to behave like biobrick prefix after xbaI digest)
BBa_K2132005BBa_K2132005 Version 1 (Component)HydA with SpyTag, Histag and TEV site
BBa_K315012BBa_K315012 Version 1 (Component)LoxBri (F) Variant forward lox site with 3 base changes in the spacer region
BBa_K2132099BBa_K2132099 Version 1 (Component)HydA with SpyCatcher, Histag and TEV site
BBa_K1114420BBa_K1114420 Version 1 (Component)Level 1 MoClo Destination Vector with F and G fusion sites
BBa_K2132004BBa_K2132004 Version 1 (Component)HydA with SpyCatcher, Histag and TEV site
HyaA -> E.BBa_K1958001 Version 1 (Component)HyaA -> E. coli
HyaD -> EBBa_K1958004 Version 1 (Component)HyaD -> E. coli
OriTFBBa_J01002 Version 1 (Component)OriT-F (Origin of Transfer for the F-plasmid nic region)
Restriction_sitesRestriction_sites Version 1 (Component)SacI - KpnI - SmaI - BamHI - XbaI - SalI - PstI - SphI - HindIII - NotI
BBa_K1051006BBa_K1051006 Version 1 (Component)Saccharomycescerevisiae TBY-1 terminator with stopcodon