Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
lacI+pLBBa_R0011 Version 1 (Component)Promoter (lacI regulated, lambda pL hybrid)
LacIBBa_R0010 Version 1 (Component)promoter (lacI regulated)
lacIBBa_C0012 Version 1 (Component)lacI repressor from E. coli (+LVA)
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
p(tetR)BBa_R0040 Version 1 (Component)TetR repressible promoter
lux pRBBa_R0062 Version 1 (Component)Promoter (luxR & HSL regulated -- lux pR)
cI lamBBa_C0051 Version 1 (Component)cI repressor from E. coli phage lambda (+LVA)
tetRBBa_C0040 Version 1 (Component)tetracycline repressor from transposon Tn10 (+LVA)
cI lamBBa_R0051 Version 1 (Component)promoter (lambda cI regulated)
luxrBBa_C0062 Version 1 (Component)luxR repressor/activator, (no LVA?)
P(Lac) IQBBa_I14032 Version 1 (Component)promoter P(Lac) IQ
cI+luxRBBa_R0065 Version 1 (Component)Promoter (lambda cI and luxR regulated -- hybrid)
pBad/araCBBa_I0500 Version 1 (Component)Inducible pBad/araC promoter
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
LacILacI Version 1 (Component) BBa_J23100BBa_J23100 Version 1 (Component)constitutive promoter family member
BBa_J23106BBa_J23106 Version 1 (Component)constitutive promoter family member
BBa_I13453BBa_I13453 Version 1 (Component)Pbad promoter
pT7BBa_I719005 Version 1 (Component)T7 Promoter
lux pLBBa_R0063 Version 1 (Component)Promoter (luxR & HSL regulated -- lux pL)<br>
BBa_J23119BBa_J23119 Version 1 (Component)constitutive promoter family member
cI 434BBa_C0052 Version 1 (Component)cI repressor from phage 434 (+LVA)
BBa_J23101BBa_J23101 Version 1 (Component)constitutive promoter family member
BBa_I712074BBa_I712074 Version 1 (Component)T7 promoter (strong promoter from T7 bacteriophage)
OmpRBBa_R0082 Version 1 (Component)Promoter (OmpR, positive)
BBa_J33207BBa_J33207 Version 1 (Component)lac promoter and lacZ
BBa_I712004BBa_I712004 Version 1 (Component)CMV promoter
cI lamBBa_R1051 Version 1 (Component)Promoter, Standard (lambda cI regulated)<br>
cI HK022BBa_C0050 Version 1 (Component)cI repressor from phage HK022 (+LVA?)
BBa_J23114BBa_J23114 Version 1 (Component)constitutive promoter family member
Prm +BBa_I12006 Version 1 (Component)Modified lamdba Prm promoter (repressed by 434 cI)
BBa_J23102BBa_J23102 Version 1 (Component)constitutive promoter family member
BBa_K864400BBa_K864400 Version 1 (Component)Ptac, trp & lac regulated promoter
pLux/TetBBa_K176000 Version 1 (Component)pLux/Tet Hybrid Promoter: (LuxR+,TetR-)->PoPS
cI 434BBa_R0052 Version 1 (Component)Promoter (434 cI regulated)
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
BBa_J23104BBa_J23104 Version 1 (Component)constitutive promoter family member
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
BBa_J23110BBa_J23110 Version 1 (Component)constitutive promoter family member
LuxRBBa_I0462 Version 1 (Component)luxR Protein Generator
AraBBa_K808000 Version 1 (Component)araC-Pbad - Arabinose inducible regulatory promoter/repressor unit
PspaSPspaS_core Version (Component) BBa_K091146BBa_K091146 Version 1 (Component)pLas/Lux Hybrid Promoter
BBa_K180000BBa_K180000 Version 1 (Component)Hybrid promoter (trp & lac regulated -- tac pR)
AraCBBa_R0080 Version 1 (Component)Promoter (AraC regulated)
lacZ-alphaBBa_I732006 Version 1 (Component)lacZ alpha fragment