iGEM Feature Libraries
igem_feature_libraries_collection Version 1 (Unknown)
A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).

Free Genes Feature Libraries
free_genes_feature_libraries_collection Version 1 (Unknown)
A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

SyBiOntKB to SBOL conversion
SyBiOntKB2sbol Version 1 (Activity)
Conversion of the Synthetic Biology Ontology knowledge base to SBOL 2.1

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

luxI
BBa_C0061 Version 1 (Component)
autoinducer synthetase for AHL

BBa_K1381015
BBa_K1381015 Version 1 (Component)
Silencing sRNA (15 bases long) for USP45 (Based on Spot42)

BBa_K1381014
BBa_K1381014 Version 1 (Component)
Silencing sRNA (10 bases long) for USP45 (Based on Spot42)

BBa_K1381016
BBa_K1381016 Version 1 (Component)
Silencing sRNA (20 bases long) for USP45 (Based on Spot42)

mCherry
BBa_J06504 Version 1 (Component)
monomeric RFP optimized for bacteria

hixC
BBa_J44000 Version 1 (Component)
hixC binding site for Salmonella typhimurium Hin recombinase

BBa_K737031
BBa_K737031 Version 1 (Component)
Spot42 based small RNA1

BBa_K737032
BBa_K737032 Version 1 (Component)
Spot42 based small RNA2

BBa_K879021
BBa_K879021 Version 1 (Component)
rbs based on B0034

BBa_K864440
BBa_K864440 Version 1 (Component)
Small RNA spot42

luxI
BBa_C0161 Version 1 (Component)
autoinducer synthetase for AHL (no LVA)

lasI
BBa_C0078 Version 1 (Component)
autoinducer synthetase for PAI from Pseudomonas aeruginosa

REACh2
BBa_K1319002 Version 1 (Component)
RFC[25]-compatible dark quencher based on K1319000 (E0030)

BBa_K1960200
BBa_K1960200 Version 1 (Component)
sRNA carrier based on M13 bacteriophage

BBa_K228001
BBa_K228001 Version 1 (Component)
SupD-tRNA

BBa_K300010
BBa_K300010 Version 1 (Component)
PoPS-based self-inducible device

BBa_K564007
BBa_K564007 Version 1 (Component)
Regulatory device based on sRNA

Ptet-ChiXm
BBa_K564020 Version 1 (Component)
Mutated regulatory device based on sRNA.

BBa_K737058
BBa_K737058 Version 1 (Component)
Spot42 is a multitarget small RNA that mediates the discoordinate expression of the E.coli galactose

BBa_K115002
BBa_K115002 Version 1 (Component)
RNA thermometer (FourU)

rhII
BBa_C0070 Version 1 (Component)
autoinducer synthetase for N-butyryl-HSL (BHL) and HHL

BBa_K1472610
BBa_K1472610 Version 1 (Component)
Delta 15 desaturase

BBa_K1365169
BBa_K1365169 Version 1 (Component)
signal sequence from USP45 fused to aiiA

BBa_J23008
BBa_J23008 Version 1 (Component)
[key3c] riboregulator for lock3 variants

BBa_I13401
BBa_I13401 Version 1 (Component)
GFP reporter for RHS of library test constructs

BBa_K766004
BBa_K766004 Version 1 (Component)
AndNot gate based on AHL

BBa_K115001
BBa_K115001 Version 1 (Component)
RNA thermometer (ROSE)

BBa_K360115
BBa_K360115 Version 1 (Component)
Mutated red luciferase based on BBa_I712019

BBa_I2032
BBa_I2032 Version 1 (Component)
T7 RNA polymerase

USP45
BBa_K1381018 Version 1 (Component)
B0034-USP45-(GS)x5

scar
BBa_G0000 Version 1 (Component)
SpeI/XbaI scar for RBS-CDS junctions

REACh1
BBa_K1319001 Version 1 (Component)
RFC[25]-compatible dark quencher based on K1319000 (E0030)

BBa_K1654007
BBa_K1654007 Version 1 (Component)
USP45 secretion tag for Lactococcus lactis

BBa_K801039
BBa_K801039 Version 1 (Component)
SV40NLS-GAL4AD-linker-PIF3 (part for GAL4/LexA based light-switchable promoter system)

lox
BBa_J61046 Version 1 (Component)
[Lox] site for recombination

BBa_K880005
BBa_K880005 Version 1 (Component)
Strong promoter, strong RBS combination for high expression levels of proteins