SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

LacI
BBa_R0010 Version 1 (Component)
promoter (lacI regulated)

cI lam
BBa_R0051 Version 1 (Component)
promoter (lambda cI regulated)

lacI+pL
BBa_R0011 Version 1 (Component)
Promoter (lacI regulated, lambda pL hybrid)

cI lam
BBa_C0051 Version 1 (Component)
cI repressor from E. coli phage lambda (+LVA)

lux pR
BBa_R0062 Version 1 (Component)
Promoter (luxR & HSL regulated -- lux pR)

cI+luxR
BBa_R0065 Version 1 (Component)
Promoter (lambda cI and luxR regulated -- hybrid)

GFP report
BBa_E0240 Version 1 (Component)
GFP generator

LasR+PAI
BBa_R0079 Version 1 (Component)
Promoter (LasR & PAI regulated)

cI 434
BBa_R0052 Version 1 (Component)
Promoter (434 cI regulated)

cI 434
BBa_C0052 Version 1 (Component)
cI repressor from phage 434 (+LVA)

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

cI lam
BBa_R1051 Version 1 (Component)
Promoter, Standard (lambda cI regulated)<br>

lux pL
BBa_R0063 Version 1 (Component)
Promoter (luxR & HSL regulated -- lux pL)<br>

AraC
BBa_R0080 Version 1 (Component)
Promoter (AraC regulated)

cII p22
BBa_R0053 Version 1 (Component)
Promoter (p22 cII regulated)

RhlR+C4
BBa_R0071 Version 1 (Component)
Promoter (RhlR & C4-HSL regulated)

Prm +
BBa_I12006 Version 1 (Component)
Modified lamdba Prm promoter (repressed by 434 cI)

BBa_K864400
BBa_K864400 Version 1 (Component)
Ptac, trp & lac regulated promoter

cI HK022
BBa_C0050 Version 1 (Component)
cI repressor from phage HK022 (+LVA?)

cI HK022
BBa_R0050 Version 1 (Component)
Promoter (HK022 cI regulated)

BBa_I763026
BBa_I763026 Version 1 (Component)
LacI coding device regulated by pTetR

BBa_J07037
BBa_J07037 Version 1 (Component)
Threshold: Reporter module (regulated by cI)

pLambda+RF
BBa_I763007 Version 1 (Component)
promoter lambda (cI regulated) with RFP reporter

BBa_P0451
BBa_P0451 Version 1 (Component)
PoPS -> cI (lambda) [S0153]

PenI
BBa_R0074 Version 1 (Component)
Promoter (PenI regulated)

pLac+cI
BBa_I763005 Version 1 (Component)
cI repressor (+LVA) regulated by pLac Promoter

BBa_I13401
BBa_I13401 Version 1 (Component)
GFP reporter for RHS of library test constructs

cI
BBa_I9200 Version 1 (Component)
cI lambda

cinR
BBa_R0078 Version 1 (Component)
Promoter (cinR and HSL regulated)

cI TP901
BBa_R0075 Version 1 (Component)
Promoter (TP901 cI regulated)

cinR
BBa_R0077 Version 1 (Component)
Promoter (cinR and HSL regulated, RBS+)

BBa_J07038
BBa_J07038 Version 1 (Component)
Threshold: Activation module (cI anti-sense)

PL GFP
BBa_K193000 Version 1 (Component)
GFP reporter regulated by CI.

cI 434
BBa_R1052 Version 1 (Component)
Promoter, Standard (434 cI regulated)<br>

BBa_J07040
BBa_J07040 Version 1 (Component)
Threshold: Activation module (IS10-type cI antisense)

BBa_J07039
BBa_J07039 Version 1 (Component)
Threshold: Activation module (cI antisense with hairpins)

cI TP901
BBa_C0075 Version 1 (Component)
TP901 cI repressor from phage TP901-1 (+LVA)

BBa_J61002
BBa_J61002 Version 1 (Component)
EX-Ptet-S-rbsRFP-P "RFP reporter"

cI HK022
BBa_R1050 Version 1 (Component)
Promoter, Standard (HK022 cI regulated) <br>

BBa_K649001
BBa_K649001 Version 1 (Component)
GFP regulated by 3OC12-HSL and LasR

BBa_J07036
BBa_J07036 Version 1 (Component)
Threshold: Repression module (cI repressor with junk region)

BBa_K176107
BBa_K176107 Version 1 (Component)
CI Inverter + GFP Reporter: PoPS->cI-LVA+pCI->GFP

BBa_K574004
BBa_K574004 Version 1 (Component)
3OC12HSL regulated by TetR

BBa_K182005
BBa_K182005 Version 1 (Component)
TetR regulated by CI operator (RBS+, Term-) with LVA tag

BBa_K098991
BBa_K098991 Version 1 (Component)
cI promoter with GFP reporter

BBa_K228236
BBa_K228236 Version 1 (Component)
cI->Terminator

BBa_J95001
BBa_J95001 Version 1 (Component)
Renilla Reniformis luciferase reporter