SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K112806BBa_K112806 Version 1 (Component)[T4 endolysin]
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K772101BBa_K772101 Version 1 (Component)Self-Destruction Kit: Endolysin + Holin
Restriction_sitesRestriction_sites Version 1 (Component)SacI - KpnI - SmaI - BamHI - XbaI - SalI - PstI - SphI - HindIII - NotI
EcoRIEcoRI Version 1 (Component) NheINheI Version 1 (Component) PacIPacI Version 1 (Component) SpeISpeI Version 1 (Component) RBS_cassetteRBS_cassette Version 1 (Component)AvrII restriction site (cctagg), overlapped with RBS (aggagga)
BBa_K1616022BBa_K1616022 Version 1 (Component)pDawn - Endolysin/Holin
KatBBa_I14034 Version 1 (Component)P(Kat)
mRFP sel.BBa_K1362422 Version 1 (Component)mRFP selection marker with outward BsaI restriction sites
H/E-revBBa_K1616005 Version 1 (Component)Holin/endolysin reversed - RBS and double T7 terminator
BBa_K809605BBa_K809605 Version 1 (Component)Lambda Holin in BBa format
BBa_K1493601BBa_K1493601 Version 1 (Component)Kis Antitoxin (Kis-Kid Toxin-Antitoxin System)
BBa_K300010BBa_K300010 Version 1 (Component)PoPS-based self-inducible device
<- BsaIBBa_K1362423 Version 1 (Component)BsaI reverse restriction site for RFC[105] cloning
BBa_K515106BBa_K515106 Version 1 (Component)J23103 promoer - RBS B0034-RFP E1010 - Holin K112805 - endolysin K112806
BBa_I20260BBa_I20260 Version 1 (Component)Measurement Kit Test of J23101
BBa_K1606020BBa_K1606020 Version 1 (Component)Lux promoter with holin and endolysin kill switch codin sequence
Fok_aBBa_K243000 Version 1 (Component)Protein domain (active) of the restriction endonuclease FokI
BBa_M36453BBa_M36453 Version 1 (Component)Endolysin Coding Sequence
BBa_K124014BBa_K124014 Version 1 (Component)Bacteriophage Holin Gene pS105
BBa_K1392973BBa_K1392973 Version 1 (Component)AracC+Antiholin+RBS+TetLVA+Term+TetR Promoter+ T4 Endolysin+Holin+Terminator
BBa_K112311BBa_K112311 Version 1 (Component){rbs.lambda holin!} in BBb format
BBa_M36451BBa_M36451 Version 1 (Component)Holin Coding Sequence
EcoRIEcoRI_rs Version (Component) End-revBBa_K1616006 Version 1 (Component)Endolysin reversed
BBa_K515004BBa_K515004 Version 1 (Component)T4 Anti-Holin
NheINheI_rs Version (Component) BBa_K112000BBa_K112000 Version 1 (Component)T4 holin, complete CDS, berkeley standard
BBa_K1510011BBa_K1510011 Version 1 (Component)Extracellular endolysin
Holin-revBBa_K1616007 Version 1 (Component)Holin reversed
BBa_K1904005BBa_K1904005 Version 1 (Component)Fused protein (Holin/Endolysin) with RBS and terminator, C-terminal HisTag, (RFC 25 N-Part).
BBa_K175045BBa_K175045 Version 1 (Component)Self Destructive Plasmid with GFP-LVA reporter
BBa_K576003BBa_K576003 Version 1 (Component)Left Part of Self-Excising Ribozyme
BBa_K576004BBa_K576004 Version 1 (Component)Right Part of Self-Excising Ribozyme
BBa_K1054002BBa_K1054002 Version 1 (Component)bacteriophage PBSX holin
BBa_K1392971BBa_K1392971 Version 1 (Component)Holin+Terminator
BBa_K175043BBa_K175043 Version 1 (Component)Inducible Self Destructive Plasmid + inducible GFP-LVA reporter
BBa_K112005BBa_K112005 Version 1 (Component)rbs.T4 holin!
Fok_iBBa_K243001 Version 1 (Component)Protein domain (inactive) of the restriction endonuclease FokI
Holin, T4BBa_K112003 Version 1 (Component)T4 holin, without start or stop codon, berkeley standard
BsaI ->BBa_K1362425 Version 1 (Component)BsaI restriction site for RFC[???] cloning (in part in prefix)
BBa_K1673402BBa_K1673402 Version 1 (Component)Endolysin (Mutation Optimized)
BBa_M36160BBa_M36160 Version 1 (Component)T7 17.5 protein (holin)