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Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Public

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Public

SyBiOntKB to SBOL conversion
SyBiOntKB2sbol Version 1 (Activity)
Conversion of the Synthetic Biology Ontology knowledge base to SBOL 2.1

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BBa_B0034
BBa_B0034 Version 1 (Component)
RBS (Elowitz 1999) -- defines RBS efficiency

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BBa_B0032
BBa_B0032 Version 1 (Component)
RBS.3 (medium) -- derivative of BBa_0030

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BBa_J61101
BBa_J61101 Version 1 (Component)
Ribosome Binding Site Family Member

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BBa_B0030
BBa_B0030 Version 1 (Component)
RBS.1 (strong) -- modified from R. Weiss

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BBa_J61120
BBa_J61120 Version 1 (Component)
Ribosome Binding Site Family Member

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lux pR
BBa_R0062 Version 1 (Component)
Promoter (luxR & HSL regulated -- lux pR)

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hixC
BBa_J44000 Version 1 (Component)
hixC binding site for Salmonella typhimurium Hin recombinase

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BBa_J61100
BBa_J61100 Version 1 (Component)
Ribosome Binding Site Family Member

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BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030

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BBa_J15001
BBa_J15001 Version 1 (Component)
strong synthetic E. coli ribosome binding site with SacI site.

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PBS_F24
PBS_F24 Version 1 (Component)

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BBa_B0033
BBa_B0033 Version 1 (Component)
RBS.4 (weaker) -- derivative of BBa_0030

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BBa_F2620
BBa_F2620 Version 1 (Component)
3OC<sub>6</sub>HSL -> PoPS Receiver

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RBS-spoVG
BBa_K143021 Version 1 (Component)
SpoVG ribosome binding site (RBS) for B. subtilis

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BBa_J85600
BBa_J85600 Version 1 (Component)
attB1 recombination site

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BBa_J04500
BBa_J04500 Version 1 (Component)
IPTG inducible promoter with RBS

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lux pL
BBa_R0063 Version 1 (Component)
Promoter (luxR & HSL regulated -- lux pL)<br>

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//binding
binding Version 1 (Collection)

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BBa_K337011
BBa_K337011 Version 1 (Component)
hsa-miR-221 Binding site pattern (2BS)

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mLacI
BBa_K1639011 Version 1 (Component)
mammalian LacI with miR-223 and miR-21 binding sites

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RhlR+C4
BBa_R0071 Version 1 (Component)
Promoter (RhlR & C4-HSL regulated)

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RBS_SpaR
RBS_SpaR Version (Component)

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RBS_SpaK
RBS_SpaK Version (Component)

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BBa_K337004
BBa_K337004 Version 1 (Component)
hsa-miR-122 Binding site pattern (2BS)

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BBa_K337003
BBa_K337003 Version 1 (Component)
hsa-miR-122 Binding site pattern (4BS)

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BBa_K337000
BBa_K337000 Version 1 (Component)
hsa-miR-122 Binding site pattern (3BS)

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RBS_cassette
RBS_cassette Version 1 (Component)
AvrII restriction site (cctagg), overlapped with RBS (aggagga)

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BBa_J61127
BBa_J61127 Version 1 (Component)
Ribosome Binding Site Family Member

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BBa_K1585999
BBa_K1585999 Version 1 (Component)
lacI binding site

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BBa_K337005
BBa_K337005 Version 1 (Component)
hsa-miR-122 Binding site pattern (2BS - additional 10bp Spacer)

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BBa_J61107
BBa_J61107 Version 1 (Component)
Ribosome Binding Site Family Member

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BBa_K337010
BBa_K337010 Version 1 (Component)
hsa-miR-122 Binding site pattern (2BS) with randomised nt9-12

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BBa_K337007
BBa_K337007 Version 1 (Component)
hsa-miR-122 Binding site pattern (2BS) with randomised nt9-12

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BBa_K337008
BBa_K337008 Version 1 (Component)
hsa-miR-122 Binding site pattern (2BS) with randomised nt9-12

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BBa_K337006
BBa_K337006 Version 1 (Component)
hsa-miR-122 Binding site pattern (2BS) with randomised nt9-12

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BBa_K337009
BBa_K337009 Version 1 (Component)
hsa-miR-122 Binding site pattern (2BS) with randomised nt9-12

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pT7
BBa_K525998 Version 1 (Component)
Promoter T7 and RBS

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HA
BBa_I712008 Version 1 (Component)
HA affinity tag

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mLacI
BBa_K1639010 Version 1 (Component)
mammalian LacI with miR-373 binding site

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cinR
BBa_R0077 Version 1 (Component)
Promoter (cinR and HSL regulated, RBS+)

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T7 RBS
BBa_K1362090 Version 1 (Component)
strong T7 RBS

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RBS-RFP
BBa_K093005 Version 1 (Component)
RFP with RBS

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BBa_K1461100
BBa_K1461100 Version 1 (Component)
miR-142-3p target binding site

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RBS-GsiB
BBa_K143020 Version 1 (Component)
GsiB ribosome binding site (RBS) for B. subtilis

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rhII
BBa_C0070 Version 1 (Component)
autoinducer synthetase for N-butyryl-HSL (BHL) and HHL

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BBa_K2041018
BBa_K2041018 Version 1 (Component)
the binding site of miR-155

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BBa_K2041017
BBa_K2041017 Version 1 (Component)
the binding site of miR-21

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